Xenopus laevis (African clawed frog): 108719495
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Entry
108719495 CDS
T01010
Symbol
scrib.L
Name
(RefSeq) protein scribble homolog isoform X1
KO
K16175
protein scribble
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
108719495 (scrib.L)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
LRR_14
LRR_8
LRR_4
PDZ_2
LRR_13
LRR_1
LRR_LRWD1
Arfaptin
Motif
Other DBs
NCBI-GeneID:
108719495
NCBI-ProteinID:
XP_041422670
Xenbase:
XB-GENE-17341481
UniProt:
A0A8J1KZE1
LinkDB
All DBs
Position
6L:complement(163384396..163440057)
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AA seq
1918 aa
AA seq
DB search
MLKCIPLWRCNRHVESVDKRHCSLHSVPDEIYRYSRSLEELLLDANQLRELPKPFFRLLN
LRKLGLSDNEIQRLPPEVANFMQLVELDISRNDIPEIPESIKFCKSLEIADFSGNPLSRL
PDGFTQLRSLAHLALNDVSLQTLPSDIGNLSNLITLELRENLLKSVPTSLSFLVKLEQLD
LGSNDLQVLPDTLGALPNLRELWLDRNQLSTLPSELGNLRRLVCLDVSENKLEYLPAEIS
GLMSLTDLLLSQNLLSSLPSSLGQLKQLSILKVDQNRLNQLTESIGDCENLSEVILTENL
LTVLPKSIGNLTKLTNLNVDRNRLISLPCEIGGCASLNVLSLRDNQLSTLPPELAGATEL
HVLDVAGNRLLNLPFALTNLNLKALWLAENQSQPMLKFQTEDDEKSGSKVLTCYLLPQQP
SPSLENLQNSVDESWTDGNLNRVSVIQFQEDPKTEEEDDEAAEERRGLQRRATPHPSELK
VMKKAMEGLRGDSSTPKEETGSPSNEDKRLSGLSSQSAESQRSGSTVSVGFQEEQQLNRQ
TERLTKQVLQEEEAVGGDDMEVWYTEPTVHFADKTTVLCDDDYEDYDEDRASPVERRLIR
KDTPHYKKHAKITKLPNDEVVEALLHGFSPRSLSEEEEGENGPFPRFSLPNEEEDDEVAP
DKDWEAAGSRDDRLNSQQNIKGVSFDQVNNLLIEPARIEEEELTLTILRQTGGLGISIAG
GKGSTPYKGDDEGIFISRVAEEGPAACAGMRVGDKLLEVNGVDLHNAEHHTAVEALRSSG
SSVSMTVLRERMVEPENPITMTPLRPEDDYNPRERLSIVRYPEENEEDPQSPCQRITSCL
ARNDKGLGFSIAGGVGSTPYRAGETGIFISRIAEGGAAHRDGILRVGDRVLSINGVDMTE
ARHDQAVALLTSTSPTITLLVEREPPQSGAPTDPGASPSLHRARPRSPPPPTDTGDGDEG
DAPLNNHFSQKMEDEFPIEEIVLVKSGGPLGLSIVGGSDHSSHPFGIREPGVFISKVISR
GLAARSGLRVGDRILEAAGLDLRHVTHQEAVNALLCNTQELHLLVRRDPPPPGMQEICVV
KAPGEKLGISIRGGARGHPGNPLDPTDEGVFISKVSSSGAAARDGRLKVGMRILEVNQQS
LLGMTHTEAVQSLRGVGDTLLILVCDGFDPIAVASSEASPGIIANPFAAGIGRKNSMESI
SSIDRDMSPEEMERIQKEMEMVREATQWEREDMEKVERMRREREEATRLLEEETKNYSSE
PLKLDYKTLAALPAGGQDKGARLPLGMESSSSSPVPVGLVHPVPAVVANGPTLHPVSPAA
SPLPTVLPSPVAELGEPGAPVSSAEADEVLVDCQPIRFSENPFIVANKKRAGASGASLSG
PPIGYGSAGELKTTMYNKKTPPGDPSAAKKEAPCSPSAQQTVPPRACPLSGRETRFASIK
FVSQAESRQTQPGVIKSLPLVHVTDVSPQSPSRQEHRTPQSPAPPVIPEDGFPTNAKQAY
KTYAALPSTHASLEQQDPGTPRTPDWISTSSEFFPGGLDSPEQRSFRDRQKYFEMDVKQQ
TEKPPKRVSLVGEDDLRKMKEEEARRIQMKREQLLREEEEGSAGDASPHTRGPSTPTSVF
IEGVEYKMERVDGGSLSSLTGFSPSESQRNSLEDSFRMEQRPNSMTGLTPVYPGGLESVP
PVRTVKAEKRLQERLRMQSPELTEQEKQLSPAERRALQAEKRAMWRAASNMEDSIKQYEL
SLARKLYQSRQNKPQIPEESGRMKSLEQDALKAQMMIAHSKDSRKRSTLEQLAESPSPAP
TPSPTPLEDYSPRLLTSPGRLSHSDKKFDYRQFAAIPSSKPVYEIQSPDLTGNLKCPEDS
RTSVTCSLEHIEQEPPEEEEEHGEDPAPNTSALEEMATYSNKRKLRHTRRSLETAVPT
NT seq
5757 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagtgcatccccctgtggcggtgcaatcggcacgtggagtcggtggataagcgt
cactgttcgctacactcggtgccagacgagatttatcgctacagtcgcagcctggaggag
cttctattggacgccaaccaactgcgggagctgcccaagcctttctttcggcttctgaat
ttgagaaaactgggcctgagcgacaatgagatccagcgcttgccccccgaggtggccaac
ttcatgcaactggtggagctggacattagccgcaacgacattcctgagattccggaaagc
atcaagttctgcaaatccctggagattgctgatttcagtgggaaccccctttccaggctg
ccagatggcttcacccagctccggagtctggctcaccttgcactcaatgatgtctcctta
cagactttgcccagcgatattggaaacttgtcaaacttgatcacattggaattacgggaa
aacctgctgaaatcagtgcccacgtctctctcattccttgttaaactggagcagttggat
ctgggaagcaacgacctgcaggttctgcctgacacactgggtgccttaccaaatctgcgt
gagctgtggctggacaggaaccagctctctaccttgccctcggagctggggaatctgcgg
cgattggtttgcttggatgtgtctgagaataaactggaatatctcccggcagagataagt
ggtctgatgtccctcacggacctgctgctctcacagaacctgctcagctcccttccctcc
agccttggtcagctcaagcagctgtctatcctgaaggtggatcagaatcgtctgaatcag
ttaacggagtctattggcgactgtgagaacttgagtgaggttatcctgactgagaacctg
ctgacggtgcttcccaaatccattgggaatctcacaaagctgacaaatctcaatgttgat
cggaacagactgatttcccttccatgtgaaattgggggctgtgccagtctcaacgtgttg
tccctcagagataaccagctcagtactctcccccctgaactcgctggtgccactgagctg
catgtgctggatgtggcgggtaacaggttgttaaacctcccttttgccttgaccaacctc
aatctgaaagctctgtggctggccgagaaccagtcgcaacccatgctcaaattccaaaca
gaagatgatgaaaaaagtggatctaaggtgctaacgtgctacctcctgccccagcaacct
tctcctagtctggaaaacctgcagaacagcgtggatgaaagctggacagatgggaacctc
aatcgggtcagtgtcatacagttccaggaagaccctaaaacagaggaagaggatgatgaa
gctgctgaagaaagaaggggactgcagcgcagagccacccctcaccccagtgagctgaag
gtcatgaagaaagcaatggaaggacttaggggtgacagtagcacccccaaagaggagacg
gggtctcccagcaatgaggacaagcggctcagtggcctctccagccagagtgccgagtcc
cagcgcagcggcagcacagtgtctgtggggttccaggaggagcagcagctgaacagacag
acagaaaggctgacaaagcaagtgctgcaggaagaggaagcagtggggggtgatgacatg
gaggtgtggtatactgagccgactgtgcactttgcagacaagaccactgttctctgtgat
gatgattatgaggattatgatgaagatcgagcctcccccgtggagagacggctgattcgt
aaggacactccccattataagaagcatgccaagatcactaagcttcccaatgatgaggtg
gtggaggcccttttgcacggctttagtcctagaagcctctcggaggaggaggaaggggag
aacgggcccttccccaggttctctctgccaaatgaagaggaagatgatgaggtggcacca
gacaaagactgggaagctgcagggagcagagacgacaggttaaactcccagcagaatatc
aagggtgtgtcgtttgatcaagtgaataatcttctgattgaacctgctcggatagaggag
gaagagctcactctcaccatcctgcgccaaactgggggtctgggaatcagcatcgcaggg
ggcaaaggctccaccccctacaagggcgatgatgagggcattttcatatctcgagtggca
gaggaggggcctgcagcttgtgctgggatgcgagttggggataaactgctggaggtgaat
ggagtagacttacacaatgcagaacatcacacagcagtggaggcgctgaggagttcgggg
agctcggtgtctatgactgtgctgagagagagaatggtggagcctgagaatccaatcact
atgacacccctgcgccccgaggatgattacaacccgcgggagaggctcagcattgtccga
tacccggaggaaaatgaggaggatccacagagcccgtgccagcgaatcactagctgcctg
gcacgtaatgacaaaggcttgggcttcagtattgctgggggagtaggaagcaccccatat
cgggcaggagaaaccggtatcttcatctccagaatagcagaaggtggagctgctcaccgg
gacgggattctcagagttggagacagagtcctctccatcaacggggtagatatgacagaa
gccagacatgatcaggcagtagcactgcttaccagcacctcccccaccatcactctgctg
gtagagagagagcccccccagtcaggagcccccacagacccaggagcatcgccttccctg
cacagggcccggccacgatcgcctccgccccccacggacactggagatggtgatgagggg
gatgctcccctgaataatcacttcagccaaaagatggaagacgagtttcctatagaggaa
attgtgttagtgaaatctggggggcccttggggctcagtattgtggggggcagtgaccac
tccagccatcctttcgggatccgtgagcccggagttttcatatccaaggtaatctcccgt
gggctggctgcccgcagtggactcagggtgggggatagaatcctggaagcagctggattg
gatctcagacatgtcactcaccaagaagctgtgaatgcccttctctgtaacactcaggag
ctccacctgctggtgaggagggacccgccacccccaggcatgcaggagatttgtgtagtg
aaggctcctggggagaagctggggatcagtatccgagggggagcccggggccacccagga
aatccattggatcccacagacgaaggtgtttttatctccaaggtcagttcctcgggggcc
gccgcacgagacggacgactgaaagttgggatgcgcattttggaggtgaatcagcagagc
ctgttgggtatgacccacactgaggccgtccagtcattgagaggcgtgggagatactctg
ctcatactcgtgtgtgatggattcgaccctattgctgtagcctcttctgaggcatcaccg
ggtataatcgccaatcccttcgctgctggtataggaagaaagaacagtatggaaagtatt
tcttctattgatcgagacatgagtccagaagagatggagcggatacagaaggagatggag
atggtgagagaggcgacacagtgggagagagaggacatggagaaagtggagcggatgcgt
agggagcgagaggaggccaccagactcctagaggaggagaccaagaactatagctcagag
cccctcaagctggactacaagaccctggcagcactacccgctggtgggcaggacaaggga
gcccggctccctctgggaatggaatcttccagctcttcccccgtgcccgtgggtctggta
caccccgttcctgcagttgtagccaatgggccgaccttgcaccccgtttccccagcggcg
tctccgctccccacggttcttcccagtcctgtggctgagctcggggagcccggggcccct
gtcagtagcgcagaggcagatgaggtgctagtggactgtcagcctatccggttcagtgag
aacccattcattgtggctaacaagaagcgggcgggggccagtggagctagcctgagtggg
cctcctattggctacggcagcgctggggagttgaagacaacaatgtacaacaagaagact
ccccctggggacccctcagcagccaagaaggaagccccctgttcccccagcgcacagcag
actgttccgccccgggcctgtcccctctcaggcagggagactcgctttgcctccattaag
tttgtgtcacaggcagagagccggcagacacagcccggagtgatcaagtctctgcctctg
gtgcatgtgaccgatgtctccccacaaagcccctcccggcaggagcacaggaccccccaa
agccctgctccacccgttatccctgaagatggcttccccaccaatgccaagcaggcgtat
aaaacgtacgcagccctcccctctactcatgccagcctggagcaacaggaccctgggact
ccccggactcctgactggatcagcaccagcagtgagttcttccctgggggcttagacagt
cccgagcaacgctccttccgagaccgccagaagtactttgagatggatgttaagcagcag
actgagaaaccgcccaaacgcgtgtctctggtgggggaagatgacctgaggaagatgaag
gaggaggaagcccggaggatccagatgaagagagagcagctcctccgagaagaggaagag
ggcagtgcaggagacgccagcccccatacaaggggccccagcaccccaacaagtgtcttt
attgagggagtggagtataaaatggagagggtggatggaggcagcctctcctctctcact
gggttctctccctcagaatctcagcgcaattcactggaagactctttccggatggagcag
agacccaactctatgacggggttgacccctgtatatcccgggggattggaatctgtccca
cctgtccgtacagtgaaagcagagaagcgactgcaggaacgactcagaatgcagagccct
gagctcactgagcaggagaagcagttgtccccggccgagcgcagagccctgcaagctgaa
aagagagccatgtggagggctgccagcaatatggaggacagtattaagcagtatgagttg
tctcttgcaaggaagctgtaccagtcccggcagaacaagcctcagatccctgaggagagc
ggcaggatgaagtctctggagcaggacgcactgaaggctcagatgatgattgcgcactct
aaggacagccgcaagcgcagcaccctggagcaactggccgagtccccttcccctgcaccc
acaccatcacccaccccactggaagattacagcccccggctactgacgtctccagggcga
ctgtctcattcagacaagaagtttgactacagacaatttgctgctattccgtcttccaaa
ccggtgtatgagatccagtcccctgacctgacgggaaacctgaaatgcccagaagattcc
agaacatcagttacctgtagcttagagcatatcgagcaggagccaccggaggaggaggag
gagcatggagaagatcccgcccccaacacatcagcactggaggaaatggccacatacagc
aacaagcgcaagcttcggcacacaaggcggagcctggagaccgccgtccccacatag
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integrated database retrieval system
