Xenopus laevis (African clawed frog): 108719510
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Entry
108719510 CDS
T01010
Name
(RefSeq) oocyte zinc finger protein XlCOF6-like
KO
K09228
KRAB domain-containing zinc finger protein
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
108719510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
108719510
Transcription factors [BR:
xla03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
108719510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_6
zf-C2H2_jaz
zf_UBZ
Zn-ribbon_8
zinc_ribbon_9
CpXC
zf-C2H2_11
Raffinose_syn
Motif
Other DBs
NCBI-GeneID:
108719510
NCBI-ProteinID:
XP_041422705
UniProt:
A0A8J1KZH6
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Position
6L:2346093..2355552
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AA seq
861 aa
AA seq
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MEAGPVSVGSPGATVRPLRPPATALDPSAEKESPNHKNKASIENQRTSENGQELAHRGNW
PVKEKQNLSVVRYRSVPSGSEVSKMKKIRREGSKNVQENLGQTQTHNEPCRTSNQNDWLQ
MSQEHCADTLQNTNIQDSRMAIIAKQHKNDSPKGKKANRKSHQVIKMNPLSIALSAVRPF
ICTNCGRRFHTRWNLLTHQRIHTGRRFVCSKCGKCFSHKKILIAHKWLHTGRKPFTCTEC
NTSFLWNKDLQEHEKRHKEQINSSYLFGHGGENPEASYLDPNESYGQTFGTHFWSRTDEK
PYTCAHCGKSYKYKSKLNIHLRSHMGERPFGSPECGKDFSQSDSLKTNLWNHTGEKPCVC
TECGKRFRKKWDLKTHFHVHTGEKPYACPECGKCFRLRQRMKIHHKTHAGKTFPCSECGK
FFSSKCTLKRHQKIHTGEKPHECTECGKQFLEKSKLRRHYLHHSGVKLFICPECGKSFTV
KQQLLYHQMGHSGERPHVCPECGKGFRNKVALTLHSLSHTGEKPFVCPECGKGFCHSGSL
KKHLWNHTGEKPCICTECGKGFRNNVALTVHSRSHTGEKPFVCPECGKGFCHSGSLKTHL
WNHTSDKPFVCTECGKRFMKELDLKSHFYVHTGEKPFACHECGKKFCTRQKLNIHHKTHA
GKTFPCSECGKFFNANRTLKRHQKIHTGEKPHKCTECGKQFMEKRNLQKHYLLHSRVKQF
ICPECGKSFAFKQQLQYHQMVHSGERPHVCPECGKGFKNKGGLTVHSRSHTGEKPFVCPE
CGKRYVDQRNLNYHIRSHMAEKAFECAESGIRYIDSSSLGLHLLSHITKSFVCAECGKCC
KSKAGLTNHFQTHKEDKPAFS
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atggaggcaggtccagtatctgttgggagtccaggagcaactgtgagacctctccggcca
ccggctactgctctggatccttcagcagaaaaagagtctccaaatcataagaataaagcc
agtatagaaaatcagagaacttctgaaaatgggcaggagttggcccacaggggaaactgg
cctgtgaaggagaagcagaatctcagtgttgtaagatatcgttcagttccatctggatct
gaggtgtccaaaatgaaaaagatcagaagagaaggaagtaaaaatgttcaggagaacctc
ggccaaacccaaactcacaatgaaccttgtagaacctccaaccagaatgattggcttcag
atgtctcaggagcattgtgctgatacgcttcaaaatactaatatacaggatagcagaatg
gccattattgcaaagcaacataaaaatgattctccaaaaggtaaaaaggctaataggaaa
agtcaccaagtcatcaaaatgaatcctttgtctatagctctcagtgctgtgagacctttt
atctgcacaaactgtggcaggagatttcatacccgctggaaccttctcacccaccagaga
attcacacggggaggaggtttgtctgctccaaatgtgggaaatgtttctcacacaagaag
atcctcatagctcacaaatggcttcatactgggaggaaaccattcacctgcactgaatgt
aatacgagcttcttatggaacaaggacctccaggaacatgaaaagagacacaaagaacaa
ataaatagcagttacctctttggtcacggtggagagaatccagaagccagctacttagac
cccaatgaaagctatggacaaacgtttggaacccatttttggagtcgcacagatgagaag
ccatatacttgtgctcactgtgggaagagctacaaatacaagtctaaactcaatattcat
ctaaggagtcacatgggagagagaccctttggaagccctgagtgcgggaaagacttcagt
caatctgactctctcaaaacgaacctctggaatcacacaggagagaagccttgtgtctgt
acggagtgtgggaaacggttcaggaaaaagtgggatctcaaaactcattttcatgttcac
acaggagagaaaccatatgcctgccctgagtgtgggaaatgtttcaggcttagacagagg
atgaagattcaccataaaacacacgctgggaagactttcccttgttctgagtgtggcaaa
ttcttttcttcaaagtgcactttgaagagacaccaaaagatccacactggggagaaacca
catgagtgcacagaatgtggcaaacaattcctggagaaaagtaaactacggagacattat
ctacatcattctggtgtaaaactattcatttgtcctgagtgcgggaaatcatttaccgtt
aagcagcagctcctgtatcaccaaatgggtcactctggggagaggccacatgtctgtcct
gagtgtgggaagggcttcaggaacaaagttgcactgactctgcactctcttagtcacacg
ggagagaaaccatttgtgtgcccagagtgtgggaaaggcttctgtcattccggctctctc
aaaaaacacctctggaatcacacaggagaaaagccttgcatctgtacggagtgtgggaag
ggcttcaggaacaatgttgcactgactgtgcactctcgtagtcacacgggagagaaacca
tttgtgtgccctgagtgtgggaaaggcttctgccattctggctctctcaaaactcacctc
tggaatcacacaagtgataagccttttgtctgtacggagtgtgggaaaagattcatgaaa
gagttggatctcaaatctcatttttatgttcacacaggagagaaaccatttgcctgccat
gagtgtgggaaaaaattctgtactagacaaaagttgaacattcaccataaaacacacgct
gggaagactttcccttgttctgagtgtggcaaattctttaacgcaaatcgcactctgaag
agacaccaaaagatccacactggggagaaaccacacaagtgcacagaatgcgggaaacag
ttcatggagaaaagaaatctacagaaacattatctacttcattctagggtaaagcaattt
atctgtcctgagtgcgggaaatcatttgcctttaagcagcagctccagtatcaccaaatg
gttcactctggggagaggccacatgtctgtcctgagtgtgggaagggcttcaagaacaaa
ggtggtcttactgtgcactctcgtagtcacacgggagagaaaccatttgtgtgcccagag
tgtgggaaacgctatgtggatcagagaaacctcaattatcatattcggagtcacatggca
gagaaagcatttgagtgcgccgaaagtgggataagatacatagactccagttctctgggg
cttcatcttctctctcacattacaaagtcttttgtctgcgctgaatgtgggaaatgctgc
aaatccaaggccggtctcactaatcattttcagacccacaaagaagacaaacctgctttt
agttag
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