Xenopus laevis (African clawed frog): 108719672
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Entry
108719672 CDS
T01010
Name
(RefSeq) LOW QUALITY PROTEIN: peroxisome biogenesis factor 1-like
KO
K13338
peroxin-1
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
108719672
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
108719672
Membrane trafficking [BR:
xla04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
108719672
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PEX-2N
PEX-1N
AAA_lid_3
AAA_16
RuvB_N
nSTAND3
AAA_22
RNA_helicase
AAA_14
AAA_5
AAA_24
AAA_28
NACHT
AAA_25
ABC_tran
TIP49
Sigma54_activ_2
AAA_18
AAA_7
AAA_33
Bac_DnaA
Sigma54_activat
DUF815
Mg_chelatase
NB-ARC
AAA_2
NPHP3_N
TsaE
Parvo_NS1
ATPase_2
IstB_IS21
AAA_19
DUF5906
ORC-CDC6-like
AAA_29
ATPase
KAP_NTPase
Rad17
AAA_13
AAA_23
G-alpha
cobW
Motif
Other DBs
NCBI-GeneID:
108719672
NCBI-ProteinID:
XP_018124353
UniProt:
A0A8J0VME4
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Position
6S:24746194..24772449
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AA seq
914 aa
AA seq
DB search
MLGPGPAGALVSLKLTSAKDXPEVIAQLRLEQNHVVEVSWSEQEPVYLCWMESRSGTCSV
TNVAELNRQFGETLGFSDGQQVFLKQCTNVISCKTVTVEPLTADDWDILELHASPLESHL
LDQIRIVYPKAIFPVWVDQHTCIYLQIGKCTRGSDKAYKSTKGELLMYVNPEPAPTEEPH
RHLHTDQNLFYLKLQNLGGVSNLGNSCYEHVVHCLMGNPVSRQLVASASGLRSGGVLLYG
PKGSGKTTLAKALCKEASENLESHVEEIKCKVLKGKTFENILQTLEETFEEAAWRQPSVI
LLDDLDQIAGAVSTPEMEQSPEASQSKQLAYALKDLIKKIISMDTLVSVIATCQSEHSLN
PVLISEQGTHLFQWVKAIPPPTQEERSEMLRCVIENRLNIDTASSRDIDFQYLARETEGF
VARDFTMLVERAIKSSVSTRRIFRKQDLVLSTTDFQKALNGFTPLSLRNAQLHKPKKQGW
NMVGGLHDVRQILKDTVELPAKYPELFANLPIRHRSGVLLYGAPGTGKTLLAGVIAHESR
MNFISIKGPELLSKYIGASEQAVRDVFTRAQAAKPCILFFDEFDSIAPRRGHDNTGVTDR
VVNQMLTQLDGVEGLHGVYVLAATSRPDLIDPALLRPGXLDECLYCPPPDQASRFEIFKG
LSHSMLLDENVDLKHIASLTDHFTGADLKALLYNAQLEAIHTNLSTTLPQDNNSGSDSDM
SLSSIIFLNHSSASDDLGDQVLDQSLPSLDMIKLPTEDIHSSMWRLYFGSSYDSDLGNCS
SEQTSQSLSESNSITHEFTGPTIGELVPSQALVFISSSPEDPQQHRQEQCHKLDDEISVP
KANCMNVVYDSRSQTEPKKSLLIKQHHVMNALASTRPSISQEDWKFFNRLYENVQNPKQT
NRETWRNGQKVTLA
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgctaggtcctgggccagccggggctctggtttctctgaaactcaccagcgccaaggac
nnacctgaggtgatcgcacaactgcgcctggagcagaatcatgtggtggaagtatcatgg
agtgagcaggagcccgtttatctttgctggatggagagtcggagtggcacttgctcggtt
acaaatgtggcagaactgaacagacagtttggtgagacccttgggttttcagatgggcag
caggtcttcctcaagcaatgcactaatgttatttcttgtaagacggtcacagttgagccc
ttgactgctgatgactgggacatactggaacttcatgcttcaccccttgaatcccatctt
ttggatcaaattagaatagtttatcctaaggctatattcccagtatgggttgaccagcat
acctgtatttaccttcagattggtaaatgcacccgtggcagtgacaaagcatataagtct
actaaaggagagctattaatgtatgttaatcctgagcctgcacccacagaagagcctcac
agacacctacatacagatcaaaatcttttttacttgaaactgcaaaatttaggaggggtg
agtaatctggggaattcatgctatgagcatgttgttcattgtctcatgggaaatccagtc
tccagacagctggttgcttctgcgtctggacttcgaagtggaggagttcttctttatgga
ccaaagggaagcggaaaaacaactctagcaaaagccttatgtaaagaagcatctgaaaat
ctggaatcacatgtagaagaaattaaatgtaaagtattaaaagggaaaacttttgaaaat
attcttcaaacactagaagaaacctttgaagaagcagcctggaggcagccatcagttata
cttttagatgacctcgatcaaattgccggtgcagtttctacaccagaaatggagcagagt
cctgaagcatctcaaagcaaacaacttgcatatgctttgaaagatttaataaagaaaatc
atttccatggacactttggtttctgtaatcgctacatgtcagtctgaacattctctgaat
cctgtgctaatttctgagcaaggaacacatcttttccagtgggttaaagctatcccaccg
ccaacacaggaagagagatctgaaatgctacgctgcgtgatagagaacaggctaaatatt
gacactgctagttctagagacattgacttccagtatcttgcaagagaaacagagggcttt
gtagcaagagactttaccatgcttgttgaacgagccatcaagtctagtgtgtcaacccga
cggattttcaggaaacaagatttggttttgtcaacgactgacttccaaaaagctctgaat
ggatttactccattgtccttaagaaatgcacagctgcataaaccaaagaagcagggctgg
aacatggtgggaggattacatgatgttcgccaaattctcaaggacaccgttgagttacca
gccaagtatcctgagctatttgcaaaccttcccatacgccacagatctggagtgttgctg
tacggtgcacctggaacagggaagacgctgttggctggtgttattgctcatgaaagtcga
atgaacttcatcagtattaagggtccagagctcctcagtaaatacattggggcaagtgaa
caagcagtgcgggatgtctttaccagagcccaggctgctaagccttgtattttattcttt
gatgagttcgattccattgctcctcggagaggccatgataacactggtgtaactgacaga
gtggtcaatcagatgctgacacaactcgatggagtggaaggattacacggagtatatgtt
ttggctgccactagccgccctgacttgatcgaccctgctctgctcagacctggatgattg
gatgagtgcctttattgccccccgccagaccaggcctcacgatttgaaatctttaaaggc
ctcagccattccatgcttttagatgaaaatgtggacttgaagcatattgcctctctgacg
gatcatttcactggagcggatctcaaagccttgctgtataatgctcagctggaggcaata
catacaaacctgtcaacaacccttcctcaggacaataattctggctctgacagtgatatg
agcttgtcttccataatattcctgaaccacagcagtgcttctgatgacttgggagaccaa
gttctggaccagtctttaccttccttggatatgataaagcttcccaccgaagacattcat
tccagcatgtggcgtctttactttggaagttcgtatgattcagacctgggaaactgcagt
tcagaacagacttcccagagcttatctgaaagcaattccattacacatgagtttactggg
ccgactataggagaattagtgccttcacaagctctagtgtttataagcagctcaccagaa
gatccccagcaacacaggcaggaacaatgtcacaaactagatgatgagatcagtgtaccc
aaggccaactgcatgaatgtggtctatgattctcgcagccaaacggagcccaagaagagt
cttctgataaaacaacatcacgttatgaatgcgcttgccagcacaaggccttctataagc
caagaggactggaagttttttaaccgcctatatgaaaatgttcaaaacccaaagcaaacg
aacagggaaacttggagaaatggacaaaaagtgacccttgcataa
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