Xenopus laevis (African clawed frog): 108719793
Help
Entry
108719793 CDS
T01010
Name
(RefSeq) chondroitin sulfate proteoglycan 5 isoform X2
KO
K08116
chondroitin sulfate proteoglycan 5
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
xla00535
]
108719793
Proteoglycans [BR:
xla00535
]
Cell surface proteoglycans
Others
108719793
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neural_ProG_Cyt
Chon_Sulph_att
Motif
Other DBs
NCBI-GeneID:
108719793
NCBI-ProteinID:
XP_018124439
UniProt:
A0A8J0VJ54
LinkDB
All DBs
Position
6S:complement(3170716..3209378)
Genome browser
AA seq
725 aa
AA seq
DB search
MDSWLRYWSLAALLCPLILLIRAEPKNGTGMENIDLEVDPTTSSYNQPTASFPKGNMLDA
KVDVESKSGGEDFVGETSSWSLTKAENSQESLSTESEVFAGSTTSNQVAGGLPSTDGTYQ
LHPSGITIGNNESSSCEGCRGEDINRKPPVRSLLAENHGEDEEPVTGMVWPFSREALDLE
IRKRLLKSGIVSATESQEDAGSGDHHVQEQGRQVTHQSSLGKDWDLDEFIDRATASPSQT
TITFSKGLVNPSTNKAISPDSAEIDHLLQVSREAVLKSPSSSDTDQHGQSSRKEKDQGTY
TVSEKASDPLTAQGAQGSKDITMVTDKTESPPPASVPPVSQDKASEAPPDHSVDDLINFD
YYDLFNIDGHGGLGRFPGSSVPSGDSTKKNHDKKVPWPMPELYDDFTPFDESDFYPTTSF
YADGDDEGGVEDDDDDDDIEDTDDIDEEDTGARDVGHVPKAATLTPKLQTIMVDEKPTSR
QHTPHQTFILYGGDLHPKLHPDINKDLSQTALNDSSTECRNGYVRRNYSCKSVCEMYPTY
CYNGGQCYIVENTGAFCRCNTQDYIWHKGIRCESIVTDFQVMCVAVGTAALVVLLLFMMT
VFFAKKLYLLKTENYKLRKRKYRTPSELHNDNFSLSTIAEGSHPNVRKLCDTPSNLSPHA
RALAYYDNVICQEDPNAPQKVQDLPKACLKDEEPFNIQNSLSPKLDSGKGDVDIADVKCV
LNNLT
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggattcctggctgagatactggagcctggcagccctgctgtgccccctcatcctccta
atccgggcagaacctaaaaatggaacaggcatggagaacattgacctggaggtggatcct
acaaccagttcctacaaccaaccaactgcaagctttccaaagggaaatatgttggatgca
aaagttgatgtagaatcaaagtctggtggagaagactttgtaggagagacaagttcctgg
agcctaaccaaggcagaaaattcccaggaaagcctatcaactgaatcagaggtctttgct
ggaagtacaacatctaaccaagtggctggaggcctcccatctacagacggcacttaccaa
ctccatcccagtgggattactattgggaataatgagtcatcaagctgtgagggttgtaga
ggagaagacattaaccggaagccacccgtgagatcattattagcagagaaccatggggag
gatgaggaaccagttactggtatggtgtggccttttagccgggaagccttggatttggaa
attagaaagagattacttaaaagtggaattgtttcagctacagaaagccaagaggatgct
gggagtggagatcaccatgttcaagagcaaggacgtcaggtaacccatcagagctccctg
ggaaaagattgggatttggatgagtttatagacagggcaactgcctcgccctcacagacg
accattaccttcagcaagggacttgtgaatccctcaacgaacaaagccatcagcccggac
tcagccgaaattgaccatctcctgcaagtctccagggaagccgttcttaagtctccttcc
tcttcagatactgaccaacatggtcagagttcaagaaaagaaaaggatcaggggacctac
acggtttcagagaaagcatccgatccattgacggcacaaggggctcaggggagcaaggac
atcaccatggttactgataaaacagaaagtccccctcctgccagtgtgccacctgtcagt
caagacaaggcctctgaggctccaccggatcattcagttgatgaccttataaattttgat
tattatgatctgtttaacatagacggacatggtggtttgggccgtttccctggttcttcc
gtccctagtggagactctaccaagaagaaccatgacaagaaggtcccctggcccatgcca
gaactttatgatgacttcacgccttttgacgaatcagatttttaccccactacatctttc
tatgcggatggagatgatgaagggggtgttgaggatgacgatgatgacgatgatatagag
gatacggatgacatagatgaagaagataccggggcaagagatgtaggacatgtccccaaa
gctgctactcttaccccaaagttacagactataatggtggatgagaagccaaccagtagg
caacacactccgcatcaaacctttatcctgtatggtggggatttacaccccaaattgcac
ccagacattaataaggatttgtctcaaacagcgttgaacgacagcagcactgagtgcagg
aacggatatgtccggcgcaactactcctgcaagtcagtgtgtgagatgtaccccacctac
tgctacaacgggggccagtgctacattgtggagaacacgggggcattttgcaggtgcaac
acccaggattacatttggcacaagggcattcgctgcgagtccatcgttacggatttccag
gtgatgtgcgtggctgtgggtacggcggctctggtggtccttctgctcttcatgatgaca
gttttctttgccaagaaactctacctgctcaaaaccgagaactacaaactgaggaaaaga
aagtacaggactccttccgagctccacaacgataacttttctctgtccaccattgctgaa
ggctcccacccaaatgtaaggaaactatgcgacactccatctaacctctccccccatgcc
cgtgcattggcttactatgataacgttatttgtcaggaggatcccaatgctccacagaag
gtgcaggatctccctaaagcctgtctgaaggacgaagaacctttcaacatccaaaattca
ctctcccccaagcttgacagcggcaaaggggacgtggacattgcggacgtcaaatgcgtc
ctgaacaacttaacatga
DBGET
integrated database retrieval system
