Xenopus laevis (African clawed frog): 108719927
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Entry
108719927 CDS
T01010
Symbol
hoxa5.S
Name
(RefSeq) homeobox protein Hox-A5
KO
K09305
homeobox protein HoxA/B/C5
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
108719927 (hoxa5.S)
Transcription factors [BR:
xla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
108719927 (hoxa5.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
DUF2209
DUF739
Motif
Other DBs
NCBI-GeneID:
108719927
NCBI-ProteinID:
XP_018124726
Xenbase:
XB-GENE-6488471
UniProt:
A0A1L8FR89
A0A974CK50
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All DBs
Position
6S:complement(34653882..34655253)
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AA seq
272 aa
AA seq
DB search
MSSYFVNSFCGRYPNGPDYQLHNYGDQSSVSEQYRDTTSMHSSRYGYGYNGMDLSVGRTA
SNHFSANDRARNYPSNPSSSSEPRYNQPAASSPPPDPLPCTAVATSPVSDPHQGGKNSIT
NSNSTTSNSTNSSTSTSTHINRDGLGASSGAEDDAPANSDQTSSQNSQSPAPSGQPQIYP
WMRKLHISHDNIGGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQ
IKIWFQNRRMKWKKDNKLKSMSMAAAGGAFRP
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgagctcttattttgtaaactcattttgcggtcgctatccaaatggcccggactaccag
ttacataattatggagatcagagctcggtgagcgagcaatacagggatacaacgagcatg
cattccagcaggtacggatacggctacaatggcatggatctcagcgttggacgcacagct
tccaaccactttagtgccaatgacagagcaaggaattatccatccaatccgagctcctct
tcagagccaaggtataaccaacctgcagcctcttctcctccacctgaccctctgccctgc
accgctgtggccacatcgcctgtcagcgaccctcaccaagggggcaaaaactccataact
aactccaacagcaccacgtccaattccaccaacagcagcactagcaccagcactcacatt
aacagagatgggctgggtgcatcttctggtgctgaggatgatgccccagcaaacagcgac
cagacaagttctcagaacagtcaaagcccagctccatcagggcaaccccaaatctaccct
tggatgcgaaaactgcacattagccatgacaacataggaggtccagaaggaaagcgagcc
cggacagcctacacccgctaccaaactctggagctggaaaaggaatttcatttcaacaga
tacctgacccgcaggaggagaattgaaatagcccatgcactctgtctctctgagaggcaa
attaaaatctggttccaaaataggagaatgaagtggaaaaaagacaataaactaaagagt
atgagcatggcagcggctgggggtgcatttcgtccttaa
DBGET
integrated database retrieval system