Xenopus laevis (African clawed frog): 108719958
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Entry
108719958 CDS
T01010
Symbol
top2b.S
Name
(RefSeq) DNA topoisomerase 2-beta isoform X1
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xla03032
]
108719958 (top2b.S)
03036 Chromosome and associated proteins [BR:
xla03036
]
108719958 (top2b.S)
Enzymes [BR:
xla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
108719958 (top2b.S)
DNA replication proteins [BR:
xla03032
]
Eukaryotic type
DNA Topoisomerases
108719958 (top2b.S)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
108719958 (top2b.S)
Centrosome formation proteins
Centriole proteins
108719958 (top2b.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
DTHCT
Toprim
HATPase_c
Microp_apicomplexa_20
Motif
Other DBs
NCBI-GeneID:
108719958
NCBI-ProteinID:
XP_018124772
Xenbase:
XB-GENE-17335740
UniProt:
A0A8J0VJU1
LinkDB
All DBs
Position
6S:complement(40213183..40264161)
Genome browser
AA seq
1719 aa
AA seq
DB search
MSKSAGGCGGAGGGSVGLTWVTETSCGGSGQTQKYTFSKAQSTRKTLFDNQNNALKKEET
ESNNKNDSKKMSVERVYQKKTQLEHILLRPDTYIGSVETVTQSMWVYDEEVGMNCRDITF
VPGLYKIFDEILVNAADNKQRDKNMNCIKISIDPDSNIISIWNNGKGIPVVEHKVEKMYV
PALIFGHLLTSSNYDDEEKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWANN
MLKTTDPKIKYFDGDDYTCITFQPDLAKFKMEKLDKDTVALLTRRAYDVAGSLKGVKVVL
NGKKLPVNGFRSYVDLYVKDKIDETGIALKVIHEVSSERWDVCLTLSEKGFQQISFVNSI
ATTKGGRHVDYVVDQIVSKLIEVVKKKNKAGVSVKPFQVKNHIWVFVNCLIENPTFDSQT
KENMTLQPKSFGSKCQLSEKFSKAASNCGIVESILNWVKFKAQTQLNKKCSSVKHSKIKG
IPKLDDANDAGGKHSLDCTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREAS
HKQIMENAEINNIIKIVGLQYKKSYDDNESLKTLRYGKIMIMTDQDQDGSHIKGLLINFF
HHNWPSLLKHSFLEEFITPIVKATKNKQELSFYSIPEFEEWKKQIENQKLWKIKYYKGLG
TSTAKEAKEYFADMDRHRIIFRYAGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQRRL
HGLPEQFLYGTATKYLTYNDFINKELILFSNSDNERSIPSLVDGLKPGQRKVLFTCFKRN
DKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNVSLLQPIGQFGTRLHGG
KDAASPRYIFTMLSPLARLLFPSVDDNLLKFLYDDNQRVEPEWYIPIIPIVLVNGAEGIG
TGWACKLPNYDTREIVNNVKRMLDGLDPYPMLPSYKNFKGTIQELGQNQYAMSGEIFVLD
RNTVEITELPVRTWTQVYKEQVLEPMLNGTDKTPSLISDYKEYHTDTTVKFVVKMTEEKL
AQAEAVGLHKVFKLQTSLTCNSMVLFDHMGCLKKYETVQDILKEFFDLRLHYYTLRKEWL
IGMLGAEAARLSNQARFILEKIQGKITIENKSKRDLIQMLVQKGFESDPVKAWKEAQEKA
TEEDDLLQDPNEDNSSDSGTGSGPDFNYILNMSLWSLSKEKVDELVRQRDIKTKELNDLK
RKSPSDLWKEDLAAFVEELERVEAQEREDVMAGFAGKAIKGKIGKPKIKKLQLEETLPSL
YGRRVEPQISAMKADASKKMLKKKKGEMDSIALKMEFDEEFGSAPAEGGAEDSLTTTPVK
PVKPKREKKEPGPRVKKNVSSPKSSTKKLKKRNPWSDVESKSESDLEEAEPEPVVIPRDS
LLRRAAAERPKYTFDFSEEEDADDDDDEGVISRNNNNNFDDLKPPSSPAANSRDDDDVLS
DSQEKDDYEFSSFKSTPAPQKPSESQKKKDYIFSSSEKVEASSKYNSDDDDNDEPSPLYS
SYSFKTSDKTTGKGSSKKESAKYNSDDDDDEPSPLYSSYSFKSTEKPTSKGSSEKESTRY
NSDEDDNDDLPFSSFTFKSSEKPASKGSTKKAKTLSDGTPKPKRPPKPKKSETSLNLDSD
LLEFGSSKKSATPKAKGRGKKRKTSDSENEGEYNPGKKPTKPASSSKKSKKASLEQDSDA
DLFSSEVASETTSRQRPGRARKEVKYFADSDDDDDFVMF
NT seq
5160 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaatccgctggcggctgcggaggagctggaggaggaagcgtaggcctcacctgg
gtgacggagacatcttgtggtgggtctgggcaaacgcagaagtacacctttagcaaggca
cagtctacaagaaaaacactttttgataatcagaacaacgcattaaaaaaggaagaaacg
gaaagcaataataaaaacgactccaaaaagatgtctgtagaaagggtttatcagaaaaag
acccaacttgagcacattcttctgcgacctgatacgtacattggatccgtggagacagtt
actcagtctatgtgggtttatgatgaagaggttggaatgaattgccgtgacataaccttt
gtgccaggtttatacaagatatttgatgaaattcttgtaaatgcagctgataataaacaa
agagataaaaatatgaactgcataaaaatttctattgatcctgattcaaacatcatcagc
atttggaataacggtaaaggaataccagtggttgaacacaaagtcgagaaaatgtatgtc
cctgccttaatttttggccatttattgacatctagcaactatgatgatgaagaaaagaag
gttacaggagggcggaatggatatggtgctaaactttgcaatatattcagcacaaaattt
actgtggagacagcttgtaaggaatacaagcatagctttaaacagacatgggcaaacaac
atgttgaagacaactgaccccaaaattaaatattttgatggagatgactacacatgcatt
acatttcagccagatttagccaagtttaaaatggaaaaattggacaaggatactgtggcc
cttctgacaagacgagcatatgatgttgcaggctccctcaaaggcgtgaaagtcgtgctt
aatggaaaaaaacttcctgtgaatggcttccgcagttacgtagatctttacgtaaaggac
aaaattgatgaaactggcattgcccttaaagtaattcatgaagtctcgagtgaaagatgg
gatgtgtgtttaactttgagtgagaaggggtttcaacaaatcagttttgtgaatagtatt
gctaccacaaagggtggtagacatgtagattatgtagtagaccaaattgtgtcaaaactt
attgaagttgtgaagaagaagaacaaagctggtgtttctgtgaagcccttccaggtgaag
aatcacatttgggtttttgtcaactgcttgattgaaaacccaactttcgattctcaaaca
aaagaaaatatgacactccagcctaaaagttttgggtccaaatgtcaactgtcggaaaaa
ttttcaaaggcggcatctaactgtggcatagtagagagcattctaaactgggttaaattc
aaggcccaaacgcagctaaataagaaatgttcatctgtgaaacacagtaaaatcaaaggc
attcctaagcttgatgatgctaatgatgcaggtggaaaacattccctggactgcactttg
atattaactgagggagattctgccaaatctttagctgtttcaggcttaggtgtcattgga
cgagatcggtacggtgtatttccactcagagggaaaattctcaatgttcgagaagcatcc
cacaaacagattatggaaaatgctgagataaacaacatcattaaaatagttggcttgcag
tacaaaaaaagctatgacgacaatgaatcccttaaaaccttgcgttatggcaaaattatg
ataatgacagatcaggatcaagatggctcgcatatcaaaggcttattgattaactttttc
catcacaattggccatctctactgaaacacagtttccttgaagaatttatcacgccgatt
gtgaaggctacaaagaataaacaggagctttcattctacagtattcctgagtttgaagaa
tggaaaaaacaaatcgaaaaccaaaaattgtggaagataaaatattacaaaggtttgggc
accagcactgcgaaggaagcaaaggaatactttgctgacatggaccggcacagaattata
tttagatatgcaggccctgaagatgatgcagcaatcactctggcttttagcaaaaagaaa
atagatgacagaaaagaatggctcacaaactttatggaagaccggcgacaacggcggctt
catggattacctgagcaattcttatatggtacagccacaaaatacttgacttacaatgac
ttcattaacaaggagctgattcttttttcaaactctgataatgagcgatctattccatct
cttgttgatggtttaaagcctgggcaaagaaaagttttgtttacttgttttaagaggaat
gataaacgggaagtcaaggttgctcagctggctggttctgttgctgaaatgtccgcttac
catcatggagagcaagccctgatgatgacaatagtaaatctcgcacagaactttgtggga
agtaacaatgtgagtttgctgcagccaattggtcagtttggtactcgactccatggtgga
aaggatgctgccagcccacgttatatttttacaatgttaagtcctctggcaagattgctt
tttccatctgtggatgataaccttttgaagttcctgtatgatgataaccagcgtgtagaa
ccagagtggtacattcctattatacccattgttttagttaatggagcagaaggaatcggt
actgggtgggcatgtaaactgcccaattacgacacaagagaaattgtcaataatgtgaag
agaatgctggatggtcttgatccatatccaatgcttccaagctacaagaattttaaaggt
acgattcaggaactgggacagaatcagtatgcaatgagcggtgaaatatttgtgcttgac
cggaacacagttgaaattacagaacttcctgttaggacatggacccaggtttacaaagaa
caagtgttggagcccatgctcaatggaacagacaaaacaccatcattaatctctgattac
aaagagtatcatacagacacaactgtgaaatttgttgtcaaaatgacagaagaaaagttg
gcacaggcagaagctgtaggcttgcataaagtcttcaaacttcaaacaagtcttacatgc
aattctatggtattatttgaccacatgggctgtttaaagaaatatgaaactgtgcaggac
attctgaaggaattctttgatctccggttacattactacaccctgcgcaaagaatggctg
ataggaatgttgggagctgaagctgcaaggctgagtaatcaagcacggttcatccttgag
aagatacaaggcaaaatcactatagagaacaaaagcaaaagggatctaattcagatgttg
gtacagaaaggatttgagtcagaccctgtgaaagcttggaaggaagcacaagaaaaagca
acagaggaggatgaccttcttcaagatccaaatgaagacaattcatcggactctggcact
ggatcaggaccagattttaactacattctgaatatgtctctctggagcctttcaaaggaa
aaagtagatgagcttgtcagacagagggatataaagaccaaagaacttaatgacctcaag
aggaagtctccatctgacctgtggaaggaagacttggcagcttttgttgaagaactagaa
agggtggaagcacaagaaagggaagacgttatggctgggtttgcaggcaaagcaataaag
ggcaaaattggcaaacccaaaataaagaaattacagcttgaagagactttgccatccctt
tatggtaggagagtagagccccaaatcagtgcaatgaaggcagatgccagcaaaaagatg
ctaaagaaaaagaagggtgaaatggactctattgcattgaaaatggagtttgatgaggaa
tttggctctgctccagcagagggaggtgcagaagattccctgactaccactcctgtaaaa
cctgtaaagcccaaaagggaaaaaaaagaacctggtcctcgagtcaaaaaaaatgtatca
tcacccaagtcatcaaccaagaaactgaaaaagcgaaacccttggtcagatgttgagtct
aaatcagagagtgacctggaagaagctgagccagagcctgtggtcattcctcgggactct
ctcctaaggagagcagctgccgaaaggcccaagtacacgtttgatttctctgaagaggaa
gatgcagatgatgatgacgatgaaggtgtcattagccgcaataataataataactttgat
gacttaaaacccccgtcttctcctgctgcaaatagtcgggatgatgatgatgttctgtct
gacagtcaagaaaaggacgactatgaattctcttcttttaagtctaccccggccccacaa
aaaccttcagaatcacaaaagaaaaaagactacatattttcatcttcagaaaaagtagaa
gcttcttcaaaatataacagtgatgatgatgacaatgatgaaccctccccactttactct
tcatactccttcaaaacgtcagacaaaacaactggcaaaggatctagtaagaaagaatct
gcaaaatataacagtgacgatgatgatgatgaaccctcccctctgtactcctcatattcc
ttcaaatctacagaaaagccaactagcaaaggatctagtgagaaagaatccactagatat
aacagtgatgaagatgataacgacgatctaccattttcatcgttcacctttaaatcttca
gaaaaaccagcgagtaaaggttctactaagaaagcaaaaacgttatcagatggaacccct
aaaccaaaacggccgccaaaaccaaagaagtccgagacttcattaaatttagattctgac
ttattagagtttggctcttcaaagaaatctgcaacgcccaaagcaaaaggaaggggaaag
aaacgaaaaacatctgattcggaaaatgagggagaatacaatcccgggaagaaacctaca
aaacctgcatcttctagcaaaaaatccaagaaagcatcattggagcaggattcagatgct
gatctcttctcttcagaagtcgcctctgagaccacgtcgcggcaaaggcctggccgggca
aggaaagaagtcaaatattttgcagactctgatgatgatgatgattttgttatgttttaa
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integrated database retrieval system
