Xenopus laevis (African clawed frog): 108720022
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Entry
108720022 CDS
T01010
Symbol
pcbp2.S
Name
(RefSeq) poly(rC)-binding protein 3 isoform X3
KO
K21444
poly(rC)-binding protein 3/4
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xla03019
]
108720022 (pcbp2.S)
Messenger RNA biogenesis [BR:
xla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
108720022 (pcbp2.S)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
KH_Vigilin
KH_5
MOEP19
DUF1598
Motif
Other DBs
NCBI-GeneID:
108720022
NCBI-ProteinID:
XP_018124866
Xenbase:
XB-GENE-17332271
UniProt:
A0A1L8FS25
A0A974CKL1
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Position
6S:complement(60131520..60626850)
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AA seq
451 aa
AA seq
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MNSNDTNAPEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGSCPER
IVTITGPTDAIFKAFSMIALKFEEDINASMTNSTVTSKPPVTLRLVVPASQCGSLIGKGG
SKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIP
YRPKPASGPIIFTGGQVRADAILASAGNHTVLAQHQPTPAFAIQGQYAIPHPDLTKLHQL
AMQHTPFTPLGQTTPGFPGLDASSPTSSHELTIPNDLIGCIIGRQGSKINEIRQMSGAQI
KIANASEGNGERQVTITGSPANISLAQYLINASLEMAKLSTQTASVTTPVDLNMNLSQST
TPSSTPTSMAVLAAAAAASAVSVNSPPPLPTLPTTHYAVPVSSLLGMKTVPLLALNAAAT
AGATGNLPAYTAKIPSTSGVKKSDRQKFAPY
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgaactctaacgacacaaatgcgccagagggaggtctaaatgtgacattgaccatacga
ttattaatgcatggaaaggaggtgggaagcatcattggaaagaaaggtgagactgttaag
aagatgagagaagagagtggtgctcgaatcaacatatcagaaggctcctgcccagaacgg
atcgttacaataacaggaccaacagatgcaatttttaaggcattttcaatgattgctctc
aagtttgaagaggatatcaacgcttccatgacaaacagcacagtgacaagcaaaccccct
gtcactttgcgattagtcgtccctgcaagccagtgtggctcacttataggaaaaggggga
tctaaaattaaagagatcagagagtccacaggtgcccaagtacaagtagcaggagatatg
ctaccaaattctacagagcgagcagttaccatatcaggaaccccagatgcgatcattcaa
tgtgttaaacaaatttgtgtggtcatgctagaatcaccgccaaaaggtgccactatccct
taccgtccaaagccagcatctggacctattatttttactggaggccaggtaagagcggat
gcaattttggcctcagctggaaatcataccgtcctggcccaacatcaaccaacacctgca
tttgcaattcagggacagtatgctatcccacatccagacttgaccaagcttcaccagttg
gctatgcagcataccccctttactccccttgggcagaccacccctggtttccctggactg
gatgcctcttctccaaccagttcccacgagcttactattccaaatgatctaatagggtgc
attattggcagacaaggcagcaaaataaatgaaatccggcagatgtcaggcgcacagatc
aagattgcaaatgcttcagagggaaatggagagagacaagtcacaattacaggctcccct
gcaaacattagtttagcacagtacctcattaatgccagcttagagatggctaaactgagc
acccagactgcttccgtcacgacccctgttgacctcaacatgaacctctctcagtctacc
accccttcctccacccccacctctatggctgtgttggcggcagctgctgctgcctccgcg
gttagcgtcaattcccctcctcccctaccaactttaccgaccacccactatgctgttcct
gtctccagtctgcttggcatgaaaactgtcccactcctggcactaaatgcagcagccact
gctggggccactgggaatttacctgcttatactgccaaaattccatcgacgagtggggtt
aagaaatctgaccgacagaagtttgctccatactga
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