KEGG   Xenopus laevis (African clawed frog): 121397099
Entry
121397099         CDS       T01010                                 
Name
(RefSeq) ras-related protein Rab-7a-like
  KO
K07897  Ras-related protein Rab-7A
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla04137  Mitophagy - animal
xla04140  Autophagy - animal
xla04144  Endocytosis
xla04145  Phagosome
xla04148  Efferocytosis
xla05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:xla00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    121397099
   04145 Phagosome
    121397099
   04140 Autophagy - animal
    121397099
   04137 Mitophagy - animal
    121397099
   04148 Efferocytosis
    121397099
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    121397099
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:xla04131]
    121397099
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:xla04147]
    121397099
   04031 GTP-binding proteins [BR:xla04031]
    121397099
Membrane trafficking [BR:xla04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    121397099
Exosome [BR:xla04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   121397099
  Exosomal proteins of other body fluids (saliva and urine)
   121397099
  Exosomal proteins of colorectal cancer cells
   121397099
  Exosomal proteins of bladder cancer cells
   121397099
GTP-binding proteins [BR:xla04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    121397099
SSDB
Motif
Pfam: Ras Roc Arf Gtr1_RagA MMR_HSR1 GTP_EFTU G-alpha ATP_bind_1 RsgA_GTPase cobW FeoB_N AAA_29 AAA_7 GIY_YIG_2 AAA_16 DAP3 AAA_lid_7 AAA_22 MCM CoaE
Other DBs
NCBI-GeneID: 121397099
NCBI-ProteinID: XP_041429172
UniProt: A0A8J1LI15
LinkDB
Position
8L:12396842..12407492
AA seq 199 aa
MFHRKHIKLLLIGNAGSGKSALMNQYVNCRFTNYYRATIGADFFTKELRVNEKIVTVQIW
DTAGTERFQSLGAALYRGTDCCLLVFDVSSPNSFHALDNWHREFLVQADPVSPGSFPFVV
IGNKTDLEERQVSPREVEEWCKRFNAKYFETSAKEARNVEEAFLEAIKLGLNYHQEPDQT
WDTKVVNLSPPSNSKKCDC
NT seq 600 nt   +upstreamnt  +downstreamnt
atgttccacaggaagcacatcaagcttcttctcattgggaatgcaggatcaggaaagtca
gcattgatgaaccaatacgtcaactgtcggtttaccaactactacagagcaactattgga
gcagatttcttcactaaggagctacgggttaatgagaagatagtgacagtgcagatatgg
gacacagcgggaacagagcgattccagtcattgggtgctgctctctatagaggcacagac
tgttgcctgttggtgtttgatgtgagctcccctaactccttccatgctctggacaactgg
cacagagagttcctggtacaagccgatcccgtttctcctggaagcttcccgttcgtggtg
atcggtaataagacagacctagaggagcggcaggtttcaccgcgggaggtagaggaatgg
tgtaaaaggttcaacgcaaagtactttgaaaccagcgctaaggaagcaaggaacgtagag
gaggcattcctggaggccatcaaattgggcttaaactatcaccaggagcctgaccagacc
tgggataccaaggtagtgaacttgtctcctccgagcaatagcaagaaatgtgactgttag

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