Xenopus laevis (African clawed frog): 373628
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Entry
373628 CDS
T01010
Symbol
blm.S, blm, blm-A, xBLM
Name
(RefSeq) Bloom syndrome protein homolog
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03440
Homologous recombination
xla03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
373628 (blm.S)
03460 Fanconi anemia pathway
373628 (blm.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xla03032
]
373628 (blm.S)
03400 DNA repair and recombination proteins [BR:
xla03400
]
373628 (blm.S)
Enzymes [BR:
xla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
373628 (blm.S)
DNA replication proteins [BR:
xla03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
373628 (blm.S)
DNA repair and recombination proteins [BR:
xla03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
373628 (blm.S)
Bloom's syndrome complex (BTR)
373628 (blm.S)
FA (Fanconi anemia) pathway
373628 (blm.S)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BLM_N
DEAD
RecQ_Zn_bind
Helicase_C
BDHCT
HRDC
RQC
ResIII
CTE_TERT
Motif
Other DBs
NCBI-GeneID:
373628
NCBI-ProteinID:
NP_001079095
Xenbase:
XB-GENE-982565
UniProt:
Q9DEY9
LinkDB
All DBs
Position
3S:35818747..35850517
Genome browser
AA seq
1364 aa
AA seq
DB search
MAALPQNNLQKQLELFPAKGTSNKLSLQKTKSSVFTFKKKCSPNVSASTGFIPFQQHVLK
DKNVNVKQDGTHTALPKATERNKINCFFTPVYTKSGQPPQVVALKDHVHGNDSANKPPST
EDAASKKTGINTSFGSVTSLEEWDDLDDFDTSVSPPKSHAGKGGKTPQKCKNTSPVASFK
IQSISPEGPTTEKHDCAKLLYDNNEVASEPRKNLHAKTAESPDQSLVCLASVEPTNLERD
MCRNTDYLGTDDLEHDQETLSQVLIEEEDDCEPDFIPPSPSDESLSSPPVLKVISAQRKH
KVSSLTDVNDCENTTDHLQGQSVSTSLDSKVPSQLLTLMLEICDLVDKIPISELHVLSCG
LDLKKKRDMRKRLLSNDSVFRSSPADSSTVSLTSCTSSTQNRDFNVNAPKGAESLSGSSV
SKVFKFNKLAVHDIGTKESENSANSAPNFMEKIGNKTSFSFRAGGDSIMENSFNFHSSVL
SNSRFNTPQNEKPISSSTCTRPYSQPIDDMDNPDLDFDIDNFDIEDLDDIHCLDSPAAPS
VSSKNVPQYPTIREAQLDSRNKEKNTRNNTGDTTNPSLLSDSLLKPQIENPAHERFRGFN
FPHSKEMMKIFHKKFGLHRFRTNQLEAINACLCGEDCFILMPTGGGKSLCYQLPGCISPG
VTIVISPLRSLIVDQVQKLTSLDIPATYLTGDKTDAEAASIYLQLSKKDPIIKLLYVTPE
KVCASTRLISTMENLYERQLLARFVIDEAHCVSQWGHDFRPDYKRLNVLRQKFQSVPMMA
LTATANPRVKKDILNQLKMTKPQIFTMSFNRDNLKYEVLPKKPKRVALDCVEWIKKHHPN
DSGIIYCLSRHECDTMADTLQKEGLAALAYHAGLADSNRDYVQHKWINQDDCQVICATIA
FGMGIDKPDVRYVIHASLPKSVEGYYQESGRAGRDGETSHCLLFYSYHDVTRIRRLIQME
KDGNSHTKQTHFNNLYSMVHYCENVVECRRMQLLSYFGENNFNPNFCKEHTQVACDNCLG
KKNYKSRDVTDDVGNIVRFVQDNCSLVQGRGKGRSNNTRLTLNMMVDIFLGSKSAKIQTG
LFGKGAAYSRHNAERLFRKLVLDRIIDEELYITFNDQAVAYVKMGERAQAVLNGFLKVDF
QDTESASSIRKQKASVVTNTSQREEMVKKCQAELTELCKRLGKIFGVHYFNIFNTATIRR
IAESLSPEPEVLLQIDGVTEDKLDKYGAELIDVLQKYSEWTLPVEDICQKSGGPANVSAR
RSNSDHDDESCDKSSYFSSNNKKGPKRKNSSYFGKSKKRKTGGDGQQSRSKNGNSSYARK
NSTAKTSSSYISGSKTGADKRPGFMAPPMPQPNRRFLKPSYSMF
NT seq
4095 nt
NT seq
+upstream
nt +downstream
nt
atggctgctctgccgcaaaataatctccagaagcaactggaacttttccctgctaagggg
acttccaacaagctttctcttcagaaaactaaatccagtgtttttacctttaaaaagaaa
tgttctccaaatgtttcagcgtcgactggctttattccatttcagcaacatgttttaaag
gacaaaaatgtaaatgtcaaacaagatggcacccacacagctttgcctaaagctacagaa
cgcaataaaataaattgttttttcactccagtctacacaaagtctggacagcctccacag
gtagtggcactaaaggaccatgtccatggtaatgactctgcaaacaagcccccaagtaca
gaggatgctgcttccaagaaaacagggattaatacttctttcggttctgtcaccagcttg
gaggaatgggatgatcttgatgattttgacacatctgtgtctcctcccaagagccatgct
gggaaaggtggaaaaactcctcagaaatgcaagaacactagtcctgttgcttcttttaaa
attcaaagtataagccctgaagggccaaccactgaaaagcatgactgtgccaagttacta
tatgacaacaatgaggtggcttctgagccacgaaaaaaccttcacgctaaaacagcagaa
tctccagaccagtcattagtatgtcttgcatctgtggagcctacaaatttagagagagac
atgtgtagaaacacagattatttagggactgatgatctagaacacgatcaagagacactt
tcacaggtgcttattgaagaagaagatgactgtgaacctgattttattcccccatcccca
tcagatgaaagtctgtcctctcctccagttttaaaagttatcagtgctcaaagaaaacac
aaagtctcctctttgacagatgtaaatgactgtgagaatacaactgatcacctgcaaggt
caaagtgtctctacatcacttgactccaaagtgccttctcaacttttgactttaatgctg
gaaatctgtgacttggttgacaagattccaatatcagagctacatgtgctgtcttgtggg
ttggaccttaagaagaaaagggacatgcggaagcgcctcttatcaaatgactctgtgttt
agatcatctcctgctgatagctcaactgtatctttgacttcctgtacatcctccacccaa
aatagggactttaatgttaatgcccccaagggtgcagagagtctctcaggatcttctgtg
agcaaagtctttaaatttaataaattggctgtacatgacattggcacaaaggaaagtgaa
aattctgctaattctgcccccaatttcatggagaaaattgggaacaaaacttcattctct
ttccgggcaggaggagattcaataatggaaaactccttcaattttcatagcagtgttctc
agcaacagccgatttaatactccacaaaacgagaagccaatttcatctagtacttgtacc
agaccctacagccagcccatagatgacatggataaccctgatcttgattttgatattgat
aactttgatattgaggacttggatgatattcattgcttggacagccctgcagctccatct
gtttccagcaaaaatgttccacagtacccaacaatacgggaggcacaacttgattccaga
aataaagagaaaaatacacgtaataacactggtgatacaactaacccgtcattgttatca
gactctctactgaagccgcagatagagaacccagcccatgaacgattcagaggcttcaac
tttcctcactccaaggaaatgatgaaaattttccacaagaaatttggtttgcatcggttc
aggaccaaccagctagaagccataaatgcatgcttgtgtggggaagactgcttcattctt
atgccaacaggtggtggaaaaagtctatgctaccaactgccaggctgcatatccccagga
gttacaattgtcatctctccactccgctctctgattgtagaccaggttcaaaagctcacc
tctttggatattccagctacatatctcactggagataagacagatgctgaagctgctagt
atttatttgcaactctctaagaaagaccccattataaaacttctctacgtcaccccagaa
aaggtctgtgcaagtaccaggctaatttcaaccatggaaaatctatatgagcgtcagttg
ctggcacgatttgtcattgatgaggctcactgtgtcagtcagtggggccatgatttccgc
ccagactacaagcgcttaaatgtgctgcgccagaagttccagtctgtaccaatgatggct
ctcacagcaactgcaaacccccgagtgaagaaggacattcttaaccaactaaagatgacc
aaaccccaaatatttacaatgagctttaaccgagacaacttaaaatatgaagtccttcca
aaaaaacccaagagggtggcattggactgtgttgagtggatcaagaaacatcacccaaat
gattccggaatcatttattgtctgtctcggcatgaatgtgatacaatggcagatactctg
cagaaggagggccttgctgctcttgcgtatcatgcaggacttgccgactccaacagagat
tatgtacagcacaaatggataaaccaagatgattgccaggtaatttgtgctaccattgcc
tttggaatgggaattgataaaccagatgtgaggtatgtcattcatgcctctctaccaaag
tctgtggagggatattaccaggagtcagggagagctggccgagatggtgagacatcccac
tgcctcctattctacagctaccatgatgtaacaagaatccgtaggctgatacaaatggag
aaagatggaaacagccatacaaaacagacgcattttaacaacctatacagtatggtacac
tactgtgaaaatgtggtggaatgtcgcaggatgcaacttctgtcttacttcggtgaaaat
aatttcaatccaaacttctgcaaagagcacacacaagttgcttgtgataactgtcttggg
aagaagaactacaaatccagagatgtgacagatgatgtgggaaacattgtgagatttgtg
caagataattgctccttagtacaaggacgtggcaagggtagaagtaacaacactcgattg
acccttaacatgatggtagatatattcctaggctctaagtctgcaaaaatccagactggt
ttatttgggaaaggagctgcttattcacgacacaatgcagaacgtctcttccggaagcta
gtcctggataggataatagatgaagaactttacattactttcaatgatcaggctgtggcg
tatgtaaaaatgggagagcgggcacaagctgtgctaaatggattcttgaaggttgatttc
caagacacagaaagtgcaagcagcatcagaaaacaaaaggcatcagttgtcaccaacact
tcccaaagggaagaaatggtcaagaagtgccaagcagagctcacagaactctgcaaacgc
ttgggcaaaatatttggagtccattactttaatatctttaacacggccaccatacggaga
attgcagagtcactatctcctgagcctgaagtattacttcagattgatggtgttacagag
gataagttggataaatatggtgctgaactcatcgatgttttacagaaatattccgaatgg
acacttccagttgaagatatttgccaaaaatctggtgggcctgctaatgtctctgcaagg
agatctaatagcgatcatgatgatgagagttgtgataagtcctcttacttcagctctaac
aacaagaaaggtccaaagcggaaaaattcctcgtactttgggaagtccaaaaaacgaaag
actggaggagatggtcagcagtcccgttccaagaatgggaatagttcatacgctaggaaa
aattctactgccaaaacatctagtagctacatcagtggttcaaagacaggagctgacaaa
agacctgggtttatggctccaccaatgcctcagcccaacagacgcttccttaaaccatcc
tactctatgttttaa
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integrated database retrieval system
