Xenopus laevis (African clawed frog): 373676
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Entry
373676 CDS
T01010
Symbol
hbp1.S, hbp1-A
Name
(RefSeq) HMG box-containing protein 1
KO
K21644
HMG box transcription factor 1
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
373676 (hbp1.S)
Transcription factors [BR:
xla03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
373676 (hbp1.S)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AXH
HMG_box
HMG_box_2
MATalpha_HMGbox
Motif
Other DBs
NCBI-GeneID:
373676
NCBI-ProteinID:
NP_001079136
Xenbase:
XB-GENE-17342930
UniProt:
A0A8J0PMV9
Q8JH80
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Position
3S:73516119..73537346
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AA seq
525 aa
AA seq
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MATGLFKCYNMVWEVKAKDMPNAVQKVQLVMDNRHTGMNETLEMLKCNEHIPSSPGYESS
DDHMELDDIPELRTVPTNSTSPEVFHLDSGISHQEYSVPSWSQNTSGISENEYSCATGMN
WLTELANIATGPQSPLMQCSFYNRSSPVHIIATSKSLHSYARPPLVSTESKSNVSKSHWR
EEKAVRHERTISESESGIFCMSSFSDDDDLGWCHSWPQTVWHCFLKGTRLCFHKGRKKQW
QDVEDFAKSTRCRNERGIDSGTYKDYGSDGLKLVSYEECVSYGESVLQLTFDPGTTDVGL
LTVECKLDHPYYVKNKGWSSFYPSLTVVQHGIPCCEIHVGDVCLPPGHPDAINFDDSGVF
DTFKSYDFTPMDSSAVYVLSSMARQRRASFSGRASSPESERSEYCKDYASPRSPQTSHSP
LYNKTGRNHTSGTANSAPVTSPNKCKRPMNAFMLFAKKYRVEYTQMYPGKDNRAISVILG
DRWKKMKNEERRIYTIEAKALAEEQKRLNPDCWKRKRTNSGSQQN
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgggtttgttcaagtgttataatatggtgtgggaagtcaaggcaaaagatatg
cccaacgctgtgcagaaggtccaattggttatggataacaggcacacaggaatgaatgaa
actttggaaatgttgaagtgcaatgagcatattccatcctctcctggatatgaatcatct
gatgatcatatggagcttgatgatattccagaattgcgaactgtgccgactaattccaca
tcacctgaggttttccaccttgactcaggtatttcacaccaagaatattcagtgccttca
tggagccaaaatacctcaggcatctctgaaaatgaatattcgtgtgctactggcatgaat
tggctgactgagctggcaaatatagccacaggccctcaaagtcccttgatgcaatgttca
ttctataacagatcatcacctgttcatatwatagctaccagtaaaagtttacattcctac
gcccgccctccactggtctccacagagagtaaatcaaatgtctccaaaagtcattggcga
gaggaaaaagcagtccggcatgaacgaaccatcagtgaatcagaatctggcatcttctgc
atgtcttcattttccgatgatgatgatttaggatggtgccattcttggccacaaactgtt
tggcattgctttcttaaaggaactcgtttatgcttccataaaggacgcaaaaaacagtgg
caggatgttgaagattttgccaaaagcacaagatgcagaaatgagaggggaattgactca
ggcacatacaaggattatggttcagacggtctcaagttggtttcttatgaggagtgtgtt
tcttacggagagtccgttctgcagcttacgtttgatcctggtacaactgatgtaggtttg
ctaacagtggagtgcaaactggaccacccatattatgtgaaaaataaaggttggtcatct
ttctacccaagtctaactgtggttcagcatggtattccctgttgtgaaattcatgttgga
gatgtatgtctacctcctggacacccagatgccataaactttgatgattctggtgttttt
gatacatttaaaagttatgactttaccccaatggattcctctgctgtgtatgtgttaagt
agtatggctcgtcagcgccgtgcttcattcagtggaagagcaagcagtccagaatcagag
agatctgaatattgtaaggattatgcatctcccagatctccacagacctcccacagccca
ttgtataataagactggcaggaatcacacctcaggaactgcaaactctgcgcctgttaca
tcacccaacaagtgcaaaagaccaatgaatgctttcatgctttttgccaaaaagtacaga
gttgaatatactcagatgtatccaggaaaagataaccgagccataagtgtgatacttgga
gacaggtggaaaaagatgaagaatgaggaaaggaggatatacactatagaagcaaaagct
ctggctgaagaacaaaaacgtttaaatcccgactgttggaagaggaaaaggacaaattca
ggttcccaacagaattaa
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