Xenopus laevis (African clawed frog): 373718
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Entry
373718 CDS
T01010
Symbol
sptan1.L
Name
(RefSeq) spectrin alpha chain, non-erythrocytic 1 isoform X1
KO
K06114
spectrin alpha, non-erythrocytic (fodrin)
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04210
Apoptosis
xla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
373718 (sptan1.L)
09142 Cell motility
04820 Cytoskeleton in muscle cells
373718 (sptan1.L)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xla04812
]
373718 (sptan1.L)
Cytoskeleton proteins [BR:
xla04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
373718 (sptan1.L)
Intermediate filaments
Intermediate filament-binding proteins
373718 (sptan1.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
EFhand_Ca_insen
SH3_1
EF-hand_1
EF-hand_7
SH3_9
EF-hand_6
EF-hand_8
SH3_2
EF-hand_5
SH3_3
SH3_10
SCO1-SenC
Spectrin_3
Motif
Other DBs
NCBI-GeneID:
373718
NCBI-ProteinID:
XP_041429077
Xenbase:
XB-GENE-6252716
UniProt:
A0A8J1LHR9
LinkDB
All DBs
Position
8L:complement(10311948..10341147)
Genome browser
AA seq
2476 aa
AA seq
DB search
MDSGGVKVLETAEDIQERRQQVLDRFLRFKELSTLRRQKLEDSYRFQFFQRDADELEKWI
QEKLQIASDENYKDPTNLQGKLQKHQAFEAEVQANAGAIVKLDETGNQMISEGHFSSETI
RTRLVELHRLWELLLLKMQEKGVKLQQAQKLVQYLRECEDVLDWINDKEAIVTSEELGQD
LEHVEVLQKKFEEFQTDLAAHEERVNEVNQFASKLAQEDHPELELIKTKQDEVNASWQRL
KGLALQRQGKLFGAAEVQRFNRDVDETIGWIREKEQLMASDDFGRDLASVQALLRKHEGL
ERDLAALEEKVKALCAESDRLQQSHPMNAPQIQVKGEELITNWEQIRTLAAERHARLNDS
YKLQRFLADFRDLTSWVTEMKALINADELANDVAGAEALLDRHQEHKGEIDAHEDSFKAA
DAAGQALLNSGHYASDEVREKLTILSEERAALLELWELRRQQYEQCMDLQLFYRDTEQVD
NWMSKQEAFLLNEDLGDSLDSVEALLKKHEDFEKSLSAQEEKITALDEFATKLIQNNHYA
KEDVATRRDALLSRRNALHERALYRRTQLADSFHLQQFFRDSDELKSWINEKMKTATDEA
YKDPSNLQGKVQKHQAFEAELSANQSRIDALENSGQKLIDVNHYASDEVAARMNDVITLW
KKLLEATELKGIKLREANQQQQFNRNVEDIELWLYEVEGHLASDDYGKDLTNVQNLQKKH
ALLEADIAAHQDRIDGITIQARQFQEAGHFDADNIKKKQEALVSRYEALKDPMVARKQKL
SDSLRLQQLFRDVEDEETWIREKEPIAASTNRGKDLIGVQNLLKKHQALQAEIAGHEPRI
KAVTQKGDSMITEGHFASEEVMGKLKELNDKWATLKNKASQRRQDLEDSLQAQQYFADAN
EAESWMREKEPIVGSTDYGKDEDSAEALLKKHEALMSDLRAYGSSIQGLSEQAQACRQQV
APTDDETGKELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAY
VKKLDPAQSASRENLLEEQGSIALRQEQIDGQAQMSKEAGSVSLRMNQVEELYHNILEVG
EKRKDMLEKSCKKFMLFREANELQQWIHEKETSLTNEEVGTDLEQVEVLQKKFDDFQKDL
KANESRLKDINKVADDLESEGLITEEVQPVQHQEVYGMARDDPDSKSASPWKHVRTAVQA
VANFNSIKDLNERWKSLQQLAEERSQLLGSAHEVQRFHRDADETKEWIEEKNQALNTDSY
GHDLASAQALQRKHEGFERDLAALGDKVNSLGETAERLIQSHPESADDIQEKCTELNQAW
NSLGTRANQRKEKLGDSHDLQRFLSDFRDLMSWINGIRGLVSSDELARDVTGAEALLERH
QEHRTEIDARTGTFQAFEQFGQQLLARGHYASPEIKEKLDILEQERASLEKAWVERRMML
DQCLELQLFNRDCEQAENWMAAREAFLNSEDKGDSLDSVEALIKKHEDFDKAINVQEEKI
AALQAFADQLITADHYAKGDISSRRNEVLDRWRRLKAQMIEKRSKLGESQTLQQFSRDVD
EIEAWISEKLQTASDESYKDPTNIQLSKLLSKHQKHQAFEAELQANADRIRGVVDMGNSL
IERGACAGSEDAVKARLGALADQWQFLVSKSAEKSQKLKEANKQQNFNTGIKDFDFWLSE
VDALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNGQADSLMTSSAFDTTQVK
EKRDAINERFQRIKSMAAARRGRLNESHRLHQFFRDLDDEESWIKEKKLLVGSDDYGRDL
TGVQNLRKKHKRLEAELAAHEPAIQGVLDTGRKLADDNTIGKEEIQQRLAQFVEHWKELK
EQAAARGQRLEESLEYQQFVANVEEEEAWINEKMTLVASEDYGDTLAAIQGLLKKHEAFE
TDFTVHKDRVHDVCTNGEDLIQKNNHHVENISAKMKGLRGKVAELEKAAAQRKAKLDENS
AFLQFNWKADVVESWIGEKENSLKTDDYGRDLSSVQTLLTKQETFDAGLQAFQQEGITNI
TALKDQLLAAKHVQSRAIESRHASLMKRWNQLLDNSAARKKKLLEAQEHYRKVEDLFLTF
AKKASAFNSWFENAEEDLTDPVRCNSLEEIKALREAHDAFRNSLSSAQTDFNQLAELDRQ
IKGYRVASNPYTWFTMEALEETWRNLQKIIKERELELQKEQRRQEENDKLRQEFAQHANA
FHQWIQETRTYLLDGSCMVEESGTLESQLEATKRKHQEIRAMRSQLKKIEDLGAAMEEAL
ILDNKYTEHSTVGLAQQWDQLDQLGMRMQHNLEQQIQARNTTGVTEEALKEFSMMFKHFD
KDKSGRLNHQEFKSCLRSLGYDLPMVEEGEPDPEFEAILDTVDPNRDGHVSLQEYMAFMI
SRETENVKSSEEIESAFRALSTEQKPFVTKEELYQNLTREQADYCISHMKPYMDSKGREM
TSAYDYVEFTRSLFVN
NT seq
7431 nt
NT seq
+upstream
nt +downstream
nt
atggattcaggtggagtgaaagtgctggagacggcggaggacatccaggagaggcgccag
caagtcctggatcgattcctgcggtttaaggaactctctacactgagacggcagaagttg
gaggattcttaccgcttccagtttttccaacgagatgccgatgagcttgagaaatggatc
caggagaaactccagattgcatctgatgagaactacaaggatccaaccaacctgcagggc
aaattgcagaaacaccaggcctttgaggcagaagtacaggccaacgcaggggcgatcgtc
aaactggacgagactggaaaccaaatgatttcagaaggacatttttcatcagagaccatc
agaacccgtctggtggaattgcatcgtctgtgggagctgttgctcctaaaaatgcaagag
aaaggggttaagttacaacaggcacagaagcttgttcagtacctgcgggaatgtgaagat
gtcctagactggattaatgacaaggaggccattgtaacatctgaagagcttggtcaggat
ttggaacatgtagaggtcttacagaagaagtttgaagagtttcagactgatctggctgct
catgaagaaagagtgaatgaagtcaaccagtttgcaagtaaactggcccaggaggatcac
ccagagctggagttgataaagaccaaacaggatgaagtcaatgcaagttggcagcgcctc
aaagggctggcgctccagagacaagggaagttatttggagctgctgaagttcagcgtttt
aacagagatgttgatgaaaccattggctggataagagagaaggagcaactgatggcatct
gatgactttggccgagacttggcaagcgttcaagcactcctacgtaaacacgagggtctg
gagagggatcttgcagcactggaggagaaggtgaaagccttgtgtgcagaatcagatcgt
ctgcagcaatcgcatcccatgaacgcccctcagattcaagtgaagggagaagaactgata
accaactgggagcaaatacgcacactggcagctgaacgtcatgctcgtctcaatgattcc
tacaagcttcagcgattcctagcagactttagggacctgaccagctgggtaacagaaatg
aaagctctgatcaatgcagatgagctggccaacgatgtggctggtgcagaggctctgctt
gaccgacaccaggaacataagggggaaatcgatgcacatgaagatagctttaaagcagca
gatgctgcaggtcaggccctgctgaactctggccactatgcctccgatgaagttcgtgag
aagcttactatcctatcagaagaaagggcagctcttctagagctatgggagctccgccgt
cagcaatatgaacagtgcatggacctgcagttgttttacagagacactgaacaggtggac
aactggatgagcaagcaggaagctttcctgctcaacgaggacttgggtgattctctggac
agtgtggaagctcttctgaaaaaacacgaggattttgagaagtctcttagtgctcaggaa
gagaaaatcacggctctggatgagtttgctacaaagctaattcaaaataaccactacgcc
aaggaagatgtggctactcgtagagatgctctgctgagccgtcgcaatgctcttcacgaa
cgtgcactataccgccgtactcagctggcagactcctttcacctgcagcagttcttcagg
gactcggatgagctgaagagctggattaatgaaaagatgaagactgcaacagatgaggca
tacaaggatccctccaatctccagggtaaggtgcagaagcaccaagcttttgaggccgaa
ctctccgctaaccaaagccgtatagatgccttggagaactctggccagaaattaattgat
gtcaaccattatgcatctgatgaggtggcagcccgtatgaatgatgttatcactttgtgg
aagaagctgctagaggccactgaattgaaagggatcaagctgcgcgaagcgaaccaacag
cagcagtttaatcggaatgtggaggacatagagttgtggctgtatgaggttgaggggcat
ttggcttcagatgactatggaaaagacctgaccaatgttcagaacctgcagaaaaaacat
gccttgctggaggctgatatagcagctcaccaggaccgtatcgatggtatcactatccaa
gcacgtcagttccaagaagccggtcatttcgatgctgacaatatcaagaagaagcaggag
gcccttgttagtagatatgaggctctgaaggatcccatggttgcgcgtaagcagaagttg
tcagattctctgcgtctacaacagcttttcagggatgttgaagacgaggagacctggata
agggagaaggaacccattgcagcctccaccaacagaggcaaggatttgattggagtccag
aatctcttgaagaaacaccaggccttgcaggctgaaattgctgggcatgaaccccgcatc
aaagctgttacccagaaaggagattctatgatcaccgaaggccactttgcctctgaagaa
gtgatgggtaaattaaaggagctgaatgataagtgggccactctaaagaacaaagcatcg
caacgccgacaggaccttgaagattcgctacaagctcagcagtattttgctgatgcaaac
gaggcggagtcttggatgagggagaaggagcctattgttggaagcacagactatggcaaa
gatgaagactctgctgaggcccttctgaagaaacatgaagctcttatgtcagatctccga
gcatacggaagcagtatccagggactgagtgagcaggcccaggcctgcagacaacaagtt
gctccaacggatgatgaaactggaaaggagctggtgctggcattgtatgattaccaagag
aagagcccgagggaggtgaccatgaagaaaggagacatcttgaccttgctgaacagcaca
aacaaggattggtggaaggtggaagtgaatgatcgtcagggctttgtgcctgctgcatat
gtgaagaagctggacccagcacagtctgcatctcgagaaaacctgctggaggaacaggga
agcatcgctctccgtcaggagcagatcgatggccaggctcaaatgtctaaggaagctggc
agtgtttctctgcgtatgaatcaggttgaagaattgtaccacaatatattggaggtggga
gagaagcgaaaggacatgctagagaagagctgcaagaagttcatgttgttccgtgaggca
aatgagctgcagcagtggatacacgagaaagaaacatctcttacaaacgaagaggtcggg
actgacctggagcaagtggaggtgctgcagaagaagtttgatgacttccagaaggatttg
aaggcaaatgagtcacgtttgaaggacattaacaaggtggctgacgatcttgaatctgaa
ggcctgataacagaagaagtccagcctgtgcagcatcaggaggtgtatggaatggcgcgg
gatgaccctgactccaaatcagcatctccatggaagcatgttcgaactgctgttcaggcg
gtggctaacttcaactctatcaaggatttgaatgagcgctggaagtcgcttcaacagctg
gcagaagaaaggagtcagcttctcggcagtgcccatgaagtacaaaggttccacagagat
gccgatgagacaaaagaatggattgaagagaagaaccaggctttgaatacagacagctat
ggacatgacctggctagtgcgcaggctctgcaacgtaaacacgaagggtttgagagagac
ctcgctgctctaggagataaggtgaactctttgggagagaccgctgagcgtctgattcag
tcgcaccctgagtctgcagatgatattcaggaaaaatgcacagagcttaatcaggcctgg
aacagccttggcacccgggcaaaccagcgcaaggagaaactgggtgattctcacgatctg
cagcgcttcctcagtgactttagagatctcatgtcctggatcaatggaattcggggcttg
gtgtcatcagatgaacttgctagagatgtgaccggtgctgaggctttgctggaacgacac
caggaacaccggactgagattgatgctagaacaggcactttccaagcttttgagcagttc
gggcagcagcttctggctcgtggtcactatgccagccctgaaatcaaggagaagctggat
atcttggaacaggaacgggcaagtttggaaaaggcttgggtagaacgcagaatgatgttg
gatcagtgcttggagctgcagctctttaacagagattgtgagcaggcagagaactggatg
gcagcccgtgaagccttcctgaacagcgaggacaaaggggattccctggatagtgtggag
gctcttatcaagaaacatgaagactttgataaagccatcaatgtccaggaagagaagatt
gctgctctccaggcgtttgccgaccaattgataactgcagaccactatgcgaagggagat
atctcctcccgtcgcaatgaagtcctagacagatggcgccgtctcaaggctcagatgatt
gaaaagagatccaaacttggggaatctcagactctgcagcagttcagcagagacgttgat
gagattgaagcctggatcagtgaaaaactgcagacggctagtgatgagtcctacaaagat
cccacaaacatccagctttccaaattgctgagcaaacaccagaaacaccaggcttttgaa
gctgagctccaagccaatgctgaccgtattcgtggggtagtcgacatggggaactccctt
attgaacgaggtgcctgtgctggcagtgaggatgcagtgaaggctcgccttggagctctc
gccgatcaatggcagttccttgtaagcaagtctgcagagaagagccaaaagctgaaggaa
gcaaacaagcagcagaacttcaacactggcatcaaagattttgatttctggctgtctgag
gtggacgctttgctggcatctgaggattatggtaaggacttggcatctgtaaacaacctg
ctgaaaaaacaccagcttctggaagctgatatctctgctcatgaggaccgcctaaaagat
ctgaatgggcaggcagatagcctgatgaccagcagcgcctttgacaccacccaggtgaag
gagaaaagggatgccattaatgaacgcttccagcgcatcaaaagcatggccgctgcacgc
cgcggcaggctgaatgagtcccaccgcctgcaccagttcttcagagatcttgatgatgag
gaatcatggatcaaggaaaagaaacttctggttggatctgatgactatggccgagacttg
actggagtgcagaatttgagaaagaaacacaagagattggaagctgaactggcagctcat
gagccagccatccagggtgtgctggacactggaaggaagcttgctgacgacaacactatc
ggaaaagaggagattcagcagcgactggcacagtttgtcgagcactggaaggaactgaag
gaacaagcagcagctcgtggtcagagactggaagaatctcttgagtaccaacaatttgta
gccaatgtagaggaagaggaagcttggattaacgagaagatgactctagttgccagtgaa
gactatggtgacacactggctgccatccagggattgctcaagaagcacgaggcattcgag
acagactttacagtgcacaaagacagagtacatgatgtatgtaccaatggagaagacctg
atacagaagaacaatcaccatgtggagaatattagcgccaaaatgaagggtctccgaggg
aaggtggcggagctagagaaagcggctgcacagcgcaaggccaaacttgatgagaattcc
gctttcctgcagttcaactggaaggcggatgttgtagagtcctggatcggtgaaaaggag
aacagcctgaagactgatgattatggccgagacctctcctccgtgcagactctgcttact
aagcaggaaacatttgacgctggcctacaggctttccagcaagaaggcattaccaacatc
actgcgctgaaagaccagcttctggccgcaaagcatgtgcagtcaagggctatagagtcg
cgtcatgcttctctgatgaagcgttggaaccagttgttggataactctgctgctcgaaag
aagaagctactggaggcccaggaacactacagaaaggttgaggacttgttcctaacattt
gccaagaaagcctccgcctttaacagctggtttgagaatgctgaggaggacctgactgat
cccgttcgctgcaactccctggaggaaatcaaggcgctacgcgaggcacacgatgcattc
cgcaattccctcagctctgcccagacagatttcaaccagcttgccgaactggacaggcaa
atcaagggctaccgggtagcctccaatccctacacatggttcaccatggaggctttggag
gagacatggcgcaacctgcagaagatcataaaggaacgagaacttgagctacagaaagaa
cagcgtaggcaggaagagaacgataagctccgacaagagtttgcccagcatgccaatgct
ttccaccaatggattcaggagacaaggacctaccttctggacgggtcttgtatggtggaa
gagtctggaacactggagtcacagcttgaagcaacaaagagaaagcatcaggagatccgg
gccatgaggagtcagctgaagaagatagaagatcttggcgcagcgatggaggaggctctg
atcttggataataaatacacagaacacagcactgttgggctggcacagcaatgggaccaa
ctggatcagctaggcatgagaatgcaacacaacctggagcaacagatccaggccagaaac
acaactggtgtaacagaggaagcactcaaagaattcagcatgatgttcaagcatttcgac
aaggacaaatctggccgcctcaaccaccaagaattcaaatcttgtctgcggtccctcggc
tacgatcttcccatggtagaggaaggagaaccagacccagagtttgaagccattttggac
actgtcgatcccaacagagatgggcacgtttctctacaggaatacatggctttcatgatc
agcagagaaaccgaaaacgtcaagtccagcgaggagatagagagcgccttccgagcgctg
agtacagagcagaaaccatttgttacaaaggaagaactataccagaatctgacacgcgaa
caggcagattactgcatttcacacatgaaaccctacatggacagcaagggccgcgaaatg
acctccgcttacgactacgtggaattcacgcgctcgctatttgtgaactga
DBGET
integrated database retrieval system
