Xenopus laevis (African clawed frog): 373724
Help
Entry
373724 CDS
T01010
Symbol
sptan1.S
Name
(RefSeq) spectrin alpha chain, non-erythrocytic 1 isoform X1
KO
K06114
spectrin alpha, non-erythrocytic (fodrin)
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04210
Apoptosis
xla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
373724 (sptan1.S)
09142 Cell motility
04820 Cytoskeleton in muscle cells
373724 (sptan1.S)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xla04812
]
373724 (sptan1.S)
Cytoskeleton proteins [BR:
xla04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
373724 (sptan1.S)
Intermediate filaments
Intermediate filament-binding proteins
373724 (sptan1.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
EFhand_Ca_insen
SH3_1
EF-hand_1
EF-hand_7
EF-hand_6
SH3_9
EF-hand_8
SH3_2
EF-hand_5
SH3_3
SH3_10
Motif
Other DBs
NCBI-GeneID:
373724
NCBI-ProteinID:
XP_041430675
Xenbase:
XB-GENE-986859
UniProt:
A0A8J1LPQ3
LinkDB
All DBs
Position
8S:32791598..32826491
Genome browser
AA seq
2543 aa
AA seq
DB search
MICDSSLIKGDTISAVLSSVCHFQGCSISTVCVCVMFALRKIRIKKMDSGGVKVLETADD
IQERRQQVLDRYLRFKELSTLRRQKLDDSYRFQSFQRDADELEKWIQEKLQIASDENYKD
PTNLQGKLQKHQAFEAEVQANAGAIIKLDETGNQMISEGHFASESIRTRLVELHRLWELL
LLKMQEKGVKLLQAQKLVQYLRECEDTLDWINDKEAIVTSEELGQDLEHVEVLQKKFEEF
QTDLAAHEERVNEVNQFASKLAQDKHPEMELIKTKQDEVNAGWQRLKGLALQRQGKLFGA
AEVQRFNRDVDETIGWIREKEQLMASDDFGRDLASVQTLLRKHEGLERDLAALEEKVKAL
CTESDRLQQSHPMNAPQIQVKGEELLTNWEQIRTLAAERHARLNDSYKLQRFLADFRDLT
SWVTEMKALINADELANDVAGAEALLDRHQEHKGEIDAHEDSFKAADAAGQALLNAGHYA
SDEVREKLTILTEERTALLELWELRRQQYEQCMDLQLFYRDTEQVDNWMSKQEAFLLNED
LGDSLDSVEALLKKHEDFEKSLSAQEEKITALDEFATKLIQNNHYAKEDVATRRDALLSR
RNALHERALYRRTQLADSFHLQQFLRDSDELKSWINEKMKTATDEAYKDPSNLQGKVQKH
QAFEAELSANQSRIDALENSGQKLIDVNHYASDEVAARMNEVINLWKKLLEATELKGIKL
REANQQQQFNRNVEDIELWLYEVEGHLASDDYGKDLTNVQNLQKKHALLEADVAAHQDRI
DGITIQARQFQEAGHFDADNIKKKQEALVSRYEALKEPMAARKQKLSDSLRLQQLFRDVE
DEETWIREKEPIAASTNRGKDLIGVQNILKKHQALQAEIAGHEPRIKAVTQKGESMITEG
HFASEEVTGKLNELNDKWATLKNKASQRRQDLEDSLQAQQYFADANEAESWMREKEPIVG
STDYGKDEDSAEALLKKHEALMSDLRAYGSSIQGLREQAQSCRQQVAPTDDETGKELVLA
LYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYVKKLDPAQSASREN
LLEEQGSIALRQEQIDGQAHMSKEAGSVSLRMNQVEELYHNILEMGEKRKDMLEKSCKKF
MLFREANELQQWINEKETSLTNEEVGADLEQVEVLQKKFDDFQKDLKANESRLKDINKVA
DELESEGLITEEVQPVQHQEVYGMQRDDPDSKSASPWKSVRTAVHAVATFNSIKDLNERW
KSLQQLAEERSQLLGSAHEVQRFHRDADETKEWIEEKNQALNTDSYGHDLASAQALQRKH
EGFERDLAALGDKMNSLGETAERLIQSHPESADDIQEKCTELNQAWNSLGTRANQRKEKL
GDSHDLQRFLSDFRDLMSWINGIRGLVSSDELARDVTGAEALLERHQEHRTEIDARAGTF
QAFEQFGQQLLARGHYDSPEIKEKLDILEQERASLEKAWVERRMMLDQCLELQLFNRDCE
QAENWMAAREAFLNSEDKGDSLDSVEALIKKHEDFDKAINVQEEKIAALQAFADQLITAE
HYAKGDIASRRNEVLDRWRRLKAQMIEKRSKLGESQTLQQFSRDVDEIEAWISEKLQTAS
DESYKDPTNIQLSKLLSKHQKHQAFEAELHANADRIRGVVDMGNSLIERGACAGSEDAVK
ARLGALADQWQFLVSKSAEKSQKLKEANKQQNFNTGIKDFDFWLSEVDALLASEDYGKDL
ASVNNLLKKHQLLEADISAHEDRLKDLNGQADSLMTSSAFDTTQVKEKRDAINDRFQRIK
SMAAARRSRLNESHRLHQFFRDLDDEESWIKEKKLLVGSDDYGRDLTGVQNLRKKHKRLE
AELAAHEPAIQGVLDTGKKLADDNTIGKDEIQQRLAQFLEHWKELREQAAARGQRLEESL
EYQQFVANVEEEEAWINEKMTLVASEDYGDTLAAIQGLLKKHEAFETDFTVHKDRVHDVC
ANGEDLIQKNNHHVENISAKMKGLRGKVAELEKAAAQRKAKLDENSAFLQFNWKADVVES
WIGEKENSLKTDDYGRDLSSVQTLLTKQETFDAGLQAFQQEGITNITTLKDQLLAAKHVQ
SRAIESRHASLMKRWNQLLDNSAARKKKLLEAQEHYRKVEDLFLTFAKKASAFNSWFENA
EEDLTDPVRCNSLEEIKALREAHNAFRNSLTSAQTDFNQLAELDRQIKGYRVASNPYTWF
TMEALEETWRNLQKIIKERELELQKEQRRQEENDKLRQEFAQHANAFHQWIQETRTYLLD
GIAYRRVIRVYQYEVGDDLSGRSCMVEESGTLESQLEATKRKHQEIRAMRSQLKKIEDLG
AAMEEALILDNKYTEHSTVGLAQQWDQLDQLGMRMQHNLEQQIQARNTTGVTEEALKEFS
MMFKHFDKDKSGRLNHQEFKSCLRSLGYDLPMVEEGEPDPEFEAILDTVDPNRDGHVSLQ
EYMAFMISRETENVKSSEEIEIAFRALSTDQKPYVTKEELYQNLTREQADYCISHMKPYM
DSKGRELPSAYDYVEFTRSLFVN
NT seq
7632 nt
NT seq
+upstream
nt +downstream
nt
atgatctgcgactcttctcttattaagggagataccatttcagcagtgctgtcgtctgtg
tgtcacttccagggctgcagcattagcactgtctgtgtctgcgtcatgtttgccctacgt
aagatccgaatcaagaaaatggattcaggtggagtgaaagtgctggagaccgcagatgac
atccaggagaggcgccagcaagtcctggaccgatacctgcggtttaaggaactctctacg
ctgagacgccagaaattggacgattcttaccgcttccagtccttccagcgagatgctgat
gagctggagaaatggatccaggagaaactccaaattgcatctgatgagaactacaaggat
ccaaccaacctgcagggaaaattacaaaaacaccaggcctttgaggcagaagtacaggcc
aacgcaggggcaatcatcaaattggacgaaaccggaaaccaaatgatttcagaaggacat
tttgcatcagagagtatcagaacccggctggtggaattgcatcgtctgtgggagctgctg
ctcttgaaaatgcaagagaaaggagttaagttactacaggcgcagaagcttgttcaatat
ctgcgggaatgtgaagacaccctagattggattaatgacaaggaggccattgtaacatca
gaggagcttgggcaggatttagaacatgtagaggtcttacagaagaagtttgaagagttt
cagactgatctggccgctcatgaagaaagagtgaatgaagtcaaccagtttgccagtaaa
ttggcccaggacaaacacccagagatggagttgataaagaccaaacaagatgaagtcaat
gcaggttggcagcgccttaaaggtctggcactccagagacaagggaagttatttggagct
gctgaagttcagcgttttaacagagatgttgatgaaaccattggctggataagagagaag
gagcagctgatggcatctgatgactttggcagagacttggcaagcgttcaaacactccta
cgaaaacacgagggtctggagagggaccttgcagcgctggaggagaaggtgaaagccttg
tgtacagaatcagaccgtctgcaacaatcgcatcctatgaatgcccctcagattcaagtg
aagggagaagaactgttaaccaactgggagcaaatacgcacactggcagcagaacgacat
gctcgtctcaatgactcctacaagcttcagcgattcctagcagacttcagggacctgacc
agctgggtaacagaaatgaaagctctgataaatgcagatgaacttgccaacgatgtggcc
ggtgcagaggctctgcttgaccgacaccaagaacataagggggaaatcgatgcccatgaa
gatagctttaaagcagcagatgctgcaggtcaggccttgctgaacgctggccactatgcc
tcagatgaagtccgagagaagcttactatcctaacagaagaaaggacagctcttctggag
ctttgggagcttcgccgtcagcaatatgaacagtgcatggacctgcagctgttttacaga
gacaccgaacaggtggacaactggatgagcaaacaggaagcttttctgctcaacgaagac
ttgggtgattctctggacagcgtggaagctcttctgaaaaaacacgaggactttgagaag
tctcttagcgcccaggaagagaaaattacagctctggatgagtttgctacaaagctaatt
cagaataaccactacgccaaggaagatgtggctacccgtagagatgctctgctgagccgc
cgcaatgcacttcacgaacgtgcactctaccgccgcactcagctggcagactcctttcac
ctgcagcaattcttaagggactccgacgagctaaagagctggattaatgaaaagatgaag
actgcaacagatgaggcatacaaggatccctccaatctccagggtaaggtgcagaagcac
caagcttttgaggctgaactctctgctaatcaaagccgtatagatgccttggagaactct
ggccagaaattaattgatgtcaaccattacgcatctgatgaggtggcagcccgtatgaat
gaggtcatcaatttgtggaagaagctgctggaggccactgaattgaaagggatcaagctg
cgtgaagccaaccaacagcagcagttcaatcgtaatgtggaagacatagaactgtggctg
tatgaagttgaggggcatttggcttcagatgactatggaaaagacctgaccaatgtgcaa
aatctgcagaaaaaacatgccttgttggaggctgatgtagcggctcaccaggaccgtatt
gatggcatcactatccaagctcgtcagttccaagaggccggtcattttgatgctgacaat
atcaagaagaaacaggaggcccttgtttctagatatgaagctctgaaggaacccatggct
gcacgcaagcagaagttatccgattctctgcgtctccaacagcttttcagggatgttgaa
gatgaggagacctggataagggagaaggaacccattgcagcctccaccaacagaggcaag
gatttgattggagtccagaatatcctgaagaaacaccaggccctgcaggctgaaattgct
ggtcatgaaccccgcatcaaagcggttacccagaaaggggaatctatgatcaccgaaggc
cactttgcctctgaagaagtgacaggtaaattaaatgagctgaatgataagtgggccact
ctgaagaacaaagcatcacaacgtcgacaggaccttgaagattctctacaagctcagcag
tattttgctgatgccaacgaggctgagtcttggatgagggagaaggagcctattgttgga
agcacagactatggcaaagatgaagactctgctgaggcccttctgaagaaacatgaagct
cttatgtcagatctccgagcatatggaagcagtatccagggactgagggaacaggcccag
tcctgcagacaacaagttgccccaactgacgatgaaactggaaaggagctggtgctggca
ttgtatgattatcaagaaaagagccctagggaggtaacaatgaagaaaggagacatcttg
accttgctaaacagcacaaataaggattggtggaaggtggaagtgaatgatcgtcagggc
tttgtgcctgctgcatatgtgaagaagctggacccagcacagtctgcatctcgagaaaac
ctgctggaggaacaaggaagcattgctctccgtcaggagcaaatcgatggccaggctcac
atgtctaaggaagctggcagtgtttctctgcgtatgaatcaggttgaagaattgtaccac
aatatcttggagatgggagagaagcgcaaggacatgctagagaagagttgcaagaagttt
atgttattccgtgaggcaaatgagctgcagcagtggataaatgagaaagaaacctctctt
accaatgaagaggtcggggctgacctggaacaagtcgaagtgctgcagaagaagtttgat
gactttcagaaggatttgaaagcaaatgagtcacgtttgaaggacattaacaaggtggct
gacgagcttgaatctgaaggcttgataacagaagaagtccagcctgtgcagcatcaggag
gtgtatgggatgcagcgggatgaccctgactccaaatcagcatctccatggaagtctgtt
cgaactgctgttcatgcggtggctaccttcaactctatcaaggatttgaacgagcgctgg
aagtcgcttcaacagctggcagaagaaaggagtcagcttctcggcagtgcccatgaagta
caaagattccacagagatgctgatgagacaaaagaatggattgaagagaagaaccaggct
ttaaatacagacagctacggacatgacttggcaagtgcgcaggctctgcaacgtaaacac
gaagggtttgagagagacctcgctgctctgggagataagatgaactctttgggagagact
gctgagcgcctgatccagtcacaccctgagtctgcagatgatattcaggaaaaatgcaca
gaacttaatcaggcctggaacagccttggcacccgggcaaaccagcgcaaggagaaactg
ggcgactctcacgatctgcaacgcttcctcagtgactttagagatctcatgtcctggatc
aatggaattcggggcttggtgtcatcagatgaacttgctagagatgtgactggtgcagag
gctttgctggaacgacaccaggaacaccggactgagattgatgccagagcaggcactttc
caggcttttgagcagtttggacagcagcttctggctcgtggtcattatgacagccctgaa
atcaaggagaagctggatatcttggaacaggaacgggcaagtttggaaaaggcttgggta
gaacgcagaatgatgttggatcagtgcttggagctgcagctcttcaaccgagattgtgag
caagcggagaactggatggcagcccgtgaagccttcctgaacagcgaggataaaggggat
tccctggatagtgtggaggctctaatcaagaaacatgaagactttgataaagccattaat
gtccaggaagagaagattgctgccctccaggcatttgccgaccaattgataactgctgag
cactatgccaagggagatatcgcctcccgtcgcaatgaagtcttagacaggtggcgccgt
ctcaaggctcagatgattgaaaagagatccaagcttggggaatctcagactttgcagcag
ttcagcagggacgtcgatgagatcgaagcctggatcagtgaaaaattgcagactgctagc
gatgagtcctacaaagatcccacaaacatccagctttccaaattgctgagcaaacaccag
aaacaccaggcttttgaagctgagctccatgccaatgctgaccgtattcgtggagtagtc
gacatggggaactcccttattgagcgaggtgcttgtgctggcagtgaggatgcagtgaag
gctcgccttggagctcttgctgatcagtggcagttccttgtaagcaagtctgcagagaag
agccagaaactgaaggaagcaaacaagcagcagaacttcaacactggcatcaaagatttt
gatttctggctgtcagaggtggatgctttgctggcatcagaggactatggaaaggacttg
gcatctgttaataacctgctgaaaaaacaccagcttctggaagccgatatctctgctcac
gaggatcgcctaaaagatctcaatgggcaggcagatagtctgatgaccagcagcgccttt
gacaccacccaggtgaaggagaaaagggatgccatcaatgaccgcttccagcgcatcaaa
agcatggctgctgcacgccgcagcaggttgaatgagtcccaccgcctgcaccagttcttc
agagatcttgatgatgaggaatcatggatcaaggaaaagaaacttctggttggatccgat
gactatggtcgagatttgactggagtgcagaatttgaggaagaaacacaagagattggaa
gctgaactggcagctcatgagccagccattcagggagtgctggacactggaaagaaactt
gccgatgacaacactattggaaaagatgaaattcagcagcgactggcacagtttttagag
cactggaaggaactgagggaacaagcagcagctcgtggtcagaggctggaagaatctctt
gagtaccaacaatttgtagccaatgtagaggaagaggaagcctggattaatgaaaagatg
actctagtggccagtgaagactatggtgacacactggctgccatccagggattgctgaag
aagcacgaggcatttgagacagactttacagtgcacaaagacagagtacatgatgtatgt
gccaatggagaagacctgatacagaagaacaatcaccatgtggagaatattagtgccaaa
atgaagggtctccgtgggaaggtggcagagctagagaaggcagctgcacagcgcaaggcc
aaacttgatgagaattccgctttcctgcagttcaactggaaggcggatgttgtagagtca
tggattggtgaaaaagagaacagcctgaagactgatgattatggtagagacctctcctct
gtgcaaactcttcttactaagcaggaaacatttgacgctgggctacaggctttccagcaa
gagggcattaccaacatcactacactgaaagaccagcttctggccgcaaagcatgtgcag
tcgcgagctatagagtcccgtcatgcttctctgatgaagcgctggaaccagttgttggat
aattctgctgcccgcaagaagaagctactggaggctcaggaacactacagaaaggttgag
gacttgttcctaacatttgccaagaaagcatctgcctttaacagctggtttgagaatgct
gaggaggacttgactgatcccgttcgctgcaactctttggaggaaatcaaggcgctacgt
gaggcacacaatgccttccgcaattctctcacctctgcccagacagatttcaaccagctt
gccgaactggacaggcaaatcaagggctaccgggtagcctccaatccctacacatggttc
accatggaggctttggaggagacatggcgcaacctgcagaaaatcataaaggaacgtgaa
cttgagctacagaaagaacagcgtagacaggaagagaacgataagctccgacaagagttt
gcccagcatgccaatgctttccatcaatggattcaggagacaaggacctaccttctggac
ggcatagcctatcgccgagtcatacgtgtgtatcagtatgaagttggggatgatctttct
ggaaggtcttgtatggtggaagagtctggaacgttggagtcacaactagaagctacaaag
agaaagcatcaggagatccgggccatgaggagtcagttgaagaagatagaagatctcggc
gcagcaatggaagaggctcttatcttggataataaatacacagaacacagcactgttggg
ctggcacagcaatgggaccaactggatcagttaggcatgagaatgcaacacaacctggag
caacagatccaggccagaaacacaactggtgtaacagaggaagcactcaaagaattcagc
atgatgtttaagcattttgacaaggacaagtctggccgcctcaaccaccaagaattcaaa
tcttgtctgcggtcccttgggtacgatcttcccatggtagaggaaggagaaccagaccca
gagtttgaagccattctggacactgtagatcccaacagagatgggcacgtttctctacag
gaatacatggctttcatgattagcagagaaactgaaaacgtcaaatcaagcgaggagata
gagattgccttccgagcactgagtacagaccagaaaccatatgtcacaaaggaagaacta
taccagaatctaacacgcgaacaggcagattactgcatttcacacatgaaaccttacatg
gacagcaagggccgcgaactgccctccgcatacgactacgtggaattcacacgctcgcta
tttgtgaactga
DBGET
integrated database retrieval system
