Xenopus laevis (African clawed frog): 373770
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Entry
373770 CDS
T01010
Symbol
vcl.S
Name
(RefSeq) vinculin isoform X2
KO
K05700
vinculin
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04510
Focal adhesion
xla04520
Adherens junction
xla04810
Regulation of actin cytoskeleton
xla04820
Cytoskeleton in muscle cells
xla05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
373770 (vcl.S)
04520 Adherens junction
373770 (vcl.S)
09142 Cell motility
04820 Cytoskeleton in muscle cells
373770 (vcl.S)
04810 Regulation of actin cytoskeleton
373770 (vcl.S)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
373770 (vcl.S)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xla04812
]
373770 (vcl.S)
04147 Exosome [BR:
xla04147
]
373770 (vcl.S)
Cytoskeleton proteins [BR:
xla04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
373770 (vcl.S)
Exosome [BR:
xla04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
373770 (vcl.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
DASH_Spc34
Motif
Other DBs
NCBI-GeneID:
373770
NCBI-ProteinID:
XP_018094932
Xenbase:
XB-GENE-5759162
UniProt:
A0A8J0TUB3
LinkDB
All DBs
Position
7S:44214680..44326813
Genome browser
AA seq
1066 aa
AA seq
DB search
MPVFHTKTIESILEPVAQQISHLVIMHEEGEVDGKAIPELTAPVAAVQAAVSNLVRVGKE
TVQTTEDQIMKRDMPPAFIKVENACAKLVQAAQMLNADPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVESMEDLVTYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVNSMNTVKDLLPVLISAMKIFVTTKSSRSQGIEEALKNRNFTVEKMSAE
INEIIRVLQLTSWDEDAWASKDTEAMKRALALIDSKINQAKGWLRDPNAPPGDAGEQAVR
QILDEAGKVGELCAGTERKDILGTCRTLGQMTDQVSDLRSRGQGATPIAMQKAQQVSQGL
DVLTSKVKNAAHKLEALTNSKQAIGKKIDAAQSWLADPNGGPEGEENIRTILAEAKKIAD
LCEDPKDKEDILRSLGEIAALTAKLTDLRRQGKGDSPEARALAKQIATSLQNLQTKVNRA
VANSRPVKAAVNMDGKVEQAQRWIDNPSVDDRGVGQAAIRSLVAEGRRLANSMTGPFRQD
MIAKCDRVEQLAGQLAELALRGEGDTPLAQAVAAQLQEALKDLKGKMQEAMTQEVSDVFS
DTTTPIKLLAVAATSPPDAPNRDEVFEERAANFENHSARLGATAEKAAAVGSANKATVEG
IQAAVKSARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTR
SLLDASEEAIKKDIDKCKVAMANMQPQMLVAGATSIARRANRILLVAKREMENSEDPKFR
DTVKNASDELSKTISPMVMEAKAVAGNISNPALQKGFLDSGYRILGAVAKVREAFQPPEP
EFPPPPPDLDQLRLSDDAAPPKPPLPEGEVPPPRPPPPDEKDEEFPEQKVGEVVNQPMMV
AARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGNKRALIQCAKDIAKASDE
VTKLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQAT
EMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWARKTPWYQ
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgccggtcttccatacaaagactatagagagcatcctggagccagtggcccagcaaata
tcgcatttggttattatgcatgaagaaggcgaagtggatggcaaagcaatacctgagctc
actgctcccgtagctgctgtgcaagcggctgtcagcaatctggtgcgggttggtaaagaa
actgttcagaccactgaggatcagatcatgaagcgagatatgcctcctgcattcatcaag
gtggaaaatgcctgtgcaaagcttgttcaggcagcccagatgctgaatgctgatccatac
tctgtaccagctcgtgattaccttattgatgggtctagaggaatcttgtcgggcacttca
gatcttctcctaacatttgatgaagcagaggtgagaaaaattatccgagtgtgcaaaggc
atcctggaatatctgactgttgctgaagtggtagagagcatggaagatcttgtcacttac
actaagaacttaggtcctgggatgactaagatggcaaagatgattgatgagcgccagcag
gaattaacccatcaagaacaccgtgtgatgcttgtaaattccatgaacactgtgaaagat
cttctgccagtcctcatttctgcaatgaagatatttgtgactactaaaagttcgcgtagt
caaggaattgaagaggctttaaagaaccgcaactttacagttgaaaaaatgagtgcagaa
attaacgagatcattagagtattgcaactcacttcttgggatgaagatgcatgggccagt
aaggacactgaggccatgaagagagcattggccctgattgattctaaaataaaccaagcc
aagggttggcttagagatcctaatgctcctccaggtgatgctggagaacaagctgtgcgc
cagatactagatgaagctggaaaggttggtgagctttgtgctgggacagagcgaaaagac
atcctgggaacctgtagaactctagggcaaatgactgatcaagtgtctgacctaagatct
agagggcaaggtgctactccaattgccatgcaaaaagctcagcaggtgtctcagggcttg
gatgtcctcacatcaaaagtaaagaatgcagctcataagctagaagcactgactaattca
aagcaggctattggcaagaagattgatgcagctcagagttggctggcagatccaaatgga
ggcccagaaggagaggaaaatatccgcactatccttgctgaggctaagaagattgcagac
ctgtgtgaagaccccaaagataaagaggatattttacgttcactgggagagatagcagcg
ctcactgcaaagctcactgatctccgacgacagggaaaaggagactctcctgaagctcgt
gctttggccaaacagattgcaacttcattacagaatctgcagaccaaggtgaatcgcgct
gtggccaacagccgccctgtgaaggctgctgtaaacatggatggaaaggtggaacaagcc
caacgctggatagataacccaagcgtagatgaccggggcgttggtcaggcagccattcgg
agtttggtggcagaaggtcgcagattagcaaattctatgactgggccgttccgccaggac
atgattgcaaaatgtgaccgtgtggagcagctggcagggcagctggcagaacttgcatta
cgtggtgagggggacacaccactggctcaggctgtagcagctcagctccaggaagcactg
aaggatctaaaggggaaaatgcaggaagcaatgactcaagaagtgtctgatgttttcagt
gacacaacaacaccaattaaactcttagcagttgcagcaacatcacctcctgatgccccc
aacagagatgaggtttttgaagaaagggctgcaaactttgagaaccactcagcccgtctg
ggagctactgctgagaaggcagctgctgtaggatcagctaataaagccactgtggaggga
atacaagctgctgtgaaatcggcaagggagctaaccccccaggttgtttctgctgctcga
atcctactccggaacccaggtaatcaagccgcctatgagcactttgaaaccatgaagaat
cagtggattgacaatgtggaaaaaatgactggcttagtagatgaagcaattgacacccgg
tctcttttggatgcttctgaagaagctattaaaaaagatatagataagtgtaaagttgcc
atggctaatatgcagccacagatgctagtcgctggagctactagtattgctcgccgcgct
aatcgcattttgctggtggcaaagagagaaatggaaaactctgaagatcccaagttccgt
gatactgtaaagaatgcttcagatgagctcagtaagaccatctcccccatggtgatggaa
gctaaagcagttgctggaaatatatctaatcctgccttacaaaagggattcttagattct
ggatacagaattttgggtgctgtggctaaggtgagggaagctttccagcctccagagcca
gaatttccaccaccaccacctgatctggaccagcttcggctctctgatgatgcagcacct
ccaaagccacctttgccagaaggagaagttccaccccccagaccaccaccacctgatgag
aaggatgaggaatttccagagcagaaggtgggggaggtggtgaatcaaccaatgatggtc
gctgcaaggcaactgcatgacgaggctcgaaagtggtccagcaagggtaatgatataatt
gcagctgcaaaacgcatggctttacttatggcagaaatgtcacgacttgtcagagggggc
agtggtaataagagagctctgatccagtgtgctaaggacattgcaaaagcctcagatgaa
gtgacaaagctggctaaagaagtggctaagcagtgtacagacaaaaggatacgaacaaac
ttgcttcaggtatgtgagaggattccaactatcagcacacagctgaaaattctaagtaca
gtcaaagccactatgctgggaagaaccaatataagtgatgaagagtctgaacaggcaaca
gaaatgcttgtccataatgcacaaaacctgatgcagtccgtgaaagaaactgtgagagag
gctgaagccgcttctattaaaatacggacagatgctgggtttacactgcgctgggcccga
aaaactccatggtaccagtaa
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