Xenopus laevis (African clawed frog): 378497
Help
Entry
378497 CDS
T01010
Symbol
irx2.L, iro2, irx2, irx2-A, Xiro2
Name
(RefSeq) iroquois-class homeodomain protein irx-2
KO
K24889
iroquois-class homeodomain protein IRX
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
378497 (irx2.L)
Transcription factors [BR:
xla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
378497 (irx2.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
BUD22
Motif
Other DBs
NCBI-GeneID:
378497
NCBI-ProteinID:
NP_001079235
Xenbase:
XB-GENE-865393
UniProt:
Q6DCQ1
A0A974CMI7
LinkDB
All DBs
Position
6L:complement(71457630..71462944)
Genome browser
AA seq
455 aa
AA seq
DB search
MSYPQGYLYQPPGSLALYSCPAYGASALAAPRSEELARSSSGSAFSPYPGSAAFSAQAAT
GFSSPLQYSSDPTGFPSYMGSPYDAHAAGMTGALSYHPYGSAAYPYQLNDPAYRKNATRD
ATATLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWAPRN
KSDDEDDDEGDGERVKEEQSEKAQDSNETSAEDEGISLHVDSLTDHSCSADSDGEKLPCR
AADHLCESGSESKEKYEDEEDDGDEEDRVLPVKPATSSPLTGVEAPILNRQQEGSPRNSN
KTNLDNGMSSSSQTPASKPKLWSLAEIATSDHKHPNLGSVLSSATSSSAAHNPSYPSSSL
LGRHIYYTSPFYSNYTNYGNFNALQSQGILRYSSTAMTANEGLNQTVLSTSSMHKHTSDS
VRTASNQLDQHYRPTNYESKKDPSEVCTVGVQPYP
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatcctcagggttacctgtaccagcctcccggctcactagctctctactcctgc
ccggcgtacggggcttcagcgctggccgcccccaggagcgaggagctggccaggtcatcg
tccggctccgccttcagcccttacccgggatcggctgccttcagcgcccaagcggccacg
ggcttcagcagccccctccagtactccagcgacccgaccggattcccttcttacatggga
tctccttatgatgcccacgccgctggtatgactggggccctcagttatcacccctatgga
agtgcggcttatccctaccaacttaatgaccctgcatacagaaaaaacgcaaccagggac
gctacagccaccctgaaagcctggttgcaggagcacaggaagaacccgtaccccaccaag
ggagagaagatcatgctggccataatcaccaagatgaccctcacccaggtctccacgtgg
tttgccaatgccagaaggaggctaaaaaaggagaataaaatgacctgggctcccaggaac
aaaagcgacgatgaagatgacgatgaaggcgatggggaaagggttaaagaagaacaatcg
gaaaaggcccaagacagtaacgagacatcagcagaggacgaaggtatcagtttacacgtt
gactccctgacagatcactcttgttcggctgattccgatggagagaagttgccttgtcgg
gccgccgaccatctttgcgaatcggggtccgaatctaaagagaaatatgaggatgaggaa
gatgatggtgatgaggaagacagggtgctgccagttaaacctgcaacctcatccccactc
actggagtggaagccccgatcctcaatcgccaacaggagggaagtccaagaaactccaat
aagaccaatttggacaatgggatgtcttcaagttcgcagacaccagccagcaaaccaaaa
ctgtggtcattagctgaaatagccacctcggatcacaagcatcctaacctgggttctgtc
ttatcttcagccacttcatcgtctgcagctcacaatcccagctacccctcttcttctctt
ctagggagacacatatattatacatcgcctttttatagcaattatacgaactatgggaat
ttcaatgctctccaaagccaagggattctgcgatatagttcaacggcaatgactgctaat
gaaggactaaatcagactgtactaagcaccagttccatgcacaaacacaccagtgactct
gtaagaacggccagcaaccagctagatcagcactacaggcccacaaactatgaatcgaaa
aaagatcccagtgaagtctgcacagtaggagtacaaccatacccatag
DBGET
integrated database retrieval system
