Xenopus laevis (African clawed frog): 378568
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Entry
378568 CDS
T01010
Symbol
noct.L, ccr4l, ccrn4l, ccrn4l-a, noc, noct
Name
(RefSeq) nocturnin
KO
K18764
nocturnin [EC:
3.1.3.108
]
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xla03019
]
378568 (noct.L)
Enzymes [BR:
xla01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.108 nocturnin
378568 (noct.L)
Messenger RNA biogenesis [BR:
xla03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
378568 (noct.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
378568
NCBI-ProteinID:
NP_001079281
Xenbase:
XB-GENE-6252647
UniProt:
P79942
A0A974DYF1
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Position
1L:64877512..64903880
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AA seq
388 aa
AA seq
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MDAQLTYTMGLLEQGYLSARVCSMGNSTSRLYSALAKTLSSSAAVSQELLEASQHDQSEP
LDPKELLDECQVALQDRPARLHRDFFSLRSESSSQQPRTFRVMQWNILAQALGEGKDNFI
MCPMEALKWEERKYLILEEILMYQPDVLCLQEVDHYFDTFQPILSRLGYQCTFLAKPWSP
CLDVEHNNGPDGCALFFLQDRFQLVNSAKIRLSARTLKTNQVAIAETLQCCETGRQLCFA
VTHLKARTGWERFRLAQGSDLLDNLESITQGATVPLIICGDFNADPTEEVYKRFASSSLN
LNSAYKLLSEDGESEPPYTTWKIRTTGESCHTLDYIWYSQHALRVNAALGLPTEEQIGPN
RLPSFNYPSDHLSLVCDFSFNEDPARLL
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggatgcacagctcacrtacaccatgggcttgttggagcagggatacctgtcagcgaga
gtttgttccatgggaaacagcaccagcagactgtacagcgctcttgccaagacgcttagc
agtagtgccgctgtgtcccaggagttactggaagcctcccagcatgaccagtctgagcct
ctggatcccaaggagcttctggatgagtgccaagtggccctgcaagaccggccggcccgg
ctccaccgagactttttcagcctgaggagcgagtcaagcagccagcagccacgcacattt
cgagtgatgcagtggaacattctggcacaagctcttggtgaaggcaaagacaactttata
atgtgccctatggaggccttgaagtgggaggaaaggaaatacttgatcctggaggaaatc
ctgatgtaccagcctgatgtattgtgtctgcaggaagtagatcactactttgataccttc
cagcctatactgagcagattgggctaccagtgcactttcttggccaaaccatggtctccc
tgccttgatgtggaacacaacaatgggccagatggctgtgccttgttcttcctgcaggat
agattccagctggttaacagtgccaaaatcaggctgtcggccagaaccttaaagaccaac
caggtggccattgccgagaccctgcagtgctgtgaaactggaaggcaactgtgctttgcg
gtcacccatctaaaggcacggacgggatgggagaggtttaggctggcacaaggctctgac
ctactagacaacctagaatcgattacccagggtgccacagttccactcattatttgtgga
gacttcaatgcagaccctacagaggaagtgtacaaaagatttgcctcctccagcttgaac
ctaaacagcgcctacaagttactgagtgaagatggcgaatccgaaccaccctacactacg
tggaagatccgcactacaggagagtcatgccacactctggattacatctggtactcccag
catgccttgagggtaaacgctgctttaggtctgccaactgaagagcagattgggcccaac
agactcccttctttcaattatccctccgatcacctgtcgttagtgtgtgactttagtttt
aacgaagacccagccagattattataa
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