Xenopus laevis (African clawed frog): 378615
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Entry
378615 CDS
T01010
Symbol
hdac9.S, hdac9, hdac9-A, hdrp, MITR
Name
(RefSeq) histone deacetylase 9
KO
K11409
histone deacetylase 9 [EC:
3.5.1.98
]
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xla03036
]
378615 (hdac9.S)
Enzymes [BR:
xla01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
378615 (hdac9.S)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
378615 (hdac9.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
378615
NCBI-ProteinID:
NP_001079307
Xenbase:
XB-GENE-865808
UniProt:
Q9YGY4
LinkDB
All DBs
Position
6S:30524447..30798301
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AA seq
565 aa
AA seq
DB search
MIGKDIKSEFPIGLESISPLDLRTDLRTAVPVGDPGLREKQLQQELLIIKQQQQIQKQLL
IAEFQKQHENLTRQHQVQLQEHLKLQQELLAMKQQQELLEREKEQKMEQQRKEQEAERHR
QEQQLCHPRSKDRVKERAVASTEVKQKLQEFILSKSATKEPLTNGTSHSMGRHPKLWYTA
AHHTSLDQSSPPPSGTSPTYKCPPPGNQDDFPLRKTASEPNLKVRSRLKQKVVERRSSPL
LRRKDSIVSSSYKKRIFEVAESSVSSSSPVSGPSSPNNGPVAMEAEHETPVLSVNSRIEN
LVSHHHLVHHERSLSLLNLYTSPSLPNITLGLHATATQLNTSSSLKEQQKYDPQAPRQGV
SMAGQYAGGIPTSSNHVSLEGKANSHQAILQHLLLKEQMRQQKILASGGTPVLHQSPLAA
KDRVSPAGRVAHKLPRHRPLHRTQSAPLPQSTLAQLVIQQQHQQFLEKQKQYQQQIHMNK
ILSKSIEQLRQPEGHLEEAEEDLHGDNLMQEKSSSIDNTRSYSSTDLRTGPFGSVKVKEE
PPDSENEIKTHLQSEQKSVFAQQVT
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgatcggcaaagatataaagtctgaatttcccattggcctggagtccatctccccttta
gacttaaggactgatcttaggacagcagtgcctgttggtgatccaggtctgagagagaaa
cagctgcagcaggagcttctgataattaaacagcagcagcaaatccagaagcaacttcta
attgcagagtttcagaagcagcatgaaaacctcacaaggcaacaccaggtccagctccag
gagcacctcaagctgcagcaagaacttttagcaatgaagcaacagcaagagctcttggag
agagagaaggaacagaaaatggagcagcagagaaaagaacaggaagcagaaaggcatcgc
caggagcagcaattgtgtcaccctcgaagcaaagacagggtgaaagaaagggcagtagcc
agtacagaggtgaaacagaagctccaagagttcatactgagtaagtctgcaactaaagaa
cctttgacaaacggaaccagtcattccatgggacgccacccgaagctttggtacacagca
gcacatcatacatcactggatcaaagctcgcctccgcctagtggtacgtcgccaacatat
aaatgtcctccaccaggaaatcaagacgacttccctttaaggaaaacagcatcagaaccc
aacttgaaagttcggtcccgtttgaaacagaaagtagtggagagacggagcagcccttta
ctgagaaggaaggacagcattgtttccagctcatacaagaagagaatatttgaggttgca
gaatcttcggtgagtagcagctctccagtatctggacccagctcaccaaataatggtcca
gtcgccatggaagcagaacatgaaacgcctgtcttgtcagtgaattcccgtatagagaat
ttggtttcacatcatcatcttgtgcatcatgaaagatctttaagtctcctaaacctgtat
acatctccttctttgccgaatattactttaggactgcatgcgacagctactcagcttaat
acctcatcttcattaaaagagcaacaaaagtacgacccgcaggcaccccggcagggggtt
tcaatggccggacagtacgccggaggcattccaacatcctcaaatcatgtttccctggaa
ggaaaggccaatagtcaccaggccatactgcaacacctactgctgaaagaacagatgcgt
cagcagaagattttagcttcaggtgggacaccagttctacatcagtcacctctggcagca
aaggacagagtttcaccagccgggagagtagcccacaaactgcctcgtcacaggcccctt
caccgaacccaatctgctcctctgccccagagtaccctggctcaactggttatccaacag
cagcaccagcagttcttggagaagcagaaacaatatcagcagcagattcacatgaacaaa
atactttccaaatctattgaacaacttcgacaacccgaagggcatcttgaagaagctgag
gaagatcttcatggagataatttgatgcaagaaaagagttcctccattgataacacaaga
agttacagcagtacagatcttaggactggaccttttggatctgtgaaagtgaaagaggag
ccaccagatagtgagaatgaaattaaaacacatcttcagtctgagcagaagtcagttttt
gcgcaacaggtaacctga
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