Xenopus laevis (African clawed frog): 378629
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Entry
378629 CDS
T01010
Symbol
vax1.L, vax, vax1, vax1-a, vax1-b, vax1b, vax1b-A, xvax1, Xvax1b
Name
(RefSeq) ventral anterior homeobox 1b
KO
K09318
homeobox protein ventral anterior
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
378629 (vax1.L)
Transcription factors [BR:
xla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
378629 (vax1.L)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
HTH_28
Homez
Motif
Other DBs
NCBI-GeneID:
378629
NCBI-ProteinID:
NP_001079317
Xenbase:
XB-GENE-1188142
UniProt:
Q9DDB0
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Position
7L:3880058..3892681
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AA seq
287 aa
AA seq
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MFEKTRDMDVRCNIEENGRISKPKDNKEIRESQSKMPSTYPAPGSSEGCAKNKSSSAVDP
EYCRRILVRDAKGSLREIILPKGLDLDRPKRTRTSFTAEQLYRLEMEFQRCQYVVGRERT
ELARQLNLSETQVKVWFQNRRTKQKKDQGKDSELRSVVSETAATCSVLRLLEQGRLLSPP
GLPGLMPPCTTGTLRAPNSSGPGTTSLPTVTNTHPHQPGLHPSPTGHNIFNMPVPSLLGT
VANRLSSHPLTMAGNLQELSARYLSSSAFEPYSRSISKDSLDKKLLD
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagaagacaagagacatggacgttaggtgcaacattgaggagaatggaaggatc
tccaaacccaaagacaacaaggagatcagagagagtcaaagcaaaatgccctcgacttac
cctgcgccgggctcgtctgaaggttgcgccaagaataagagcagcagcgcagtggacccc
gaatactgcagaagaattctagtgagagatgccaaaggctccctcagggagatcatttta
cccaaagggctggatttggaccgacccaagcggacccgaacctccttcactgcggagcag
ctgtaccggctggagatggagttccagaggtgtcagtatgtggtcggcagagagagaacc
gagttggcccgacagctaaacctctctgagacccaggtgaaggtctggttccagaaccgc
agaaccaaacaaaagaaggaccagggaaaggactcggagctgcgctctgttgtgtctgaa
actgcagcaacttgcagtgtcctcaggctcctggaacagggtcgtctgctgtcccctccc
ggcctgccaggactcatgcccccctgtacaactggcaccctccgtgcccccaatagctcc
gggcctggcaccacttcacttccaactgtcaccaacacacacccccaccagcctggactt
cacccttcccccactgggcacaacatcttcaacatgcccgtgccctccctactgggcacc
gtggccaaccggctctcctctcacccactgacaatggccgggaacctacaggaactgtcg
gcccgatacctcagctcctcggcttttgagccctacagccggagcatcagtaaagattca
ctcgataaaaagctcctggactga
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