Xenopus laevis (African clawed frog): 378666
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Entry
378666 CDS
T01010
Symbol
cntn1.L, cntn-A, cntn1, F11, F3, F3/F11
Name
(RefSeq) contactin 1 L homeolog precursor
KO
K06759
contactin 1
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
378666 (cntn1.L)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xla04515
]
378666 (cntn1.L)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
xla00537
]
378666 (cntn1.L)
Cell adhesion molecules [BR:
xla04515
]
Immunoglobulin superfamily
Contactins
378666 (cntn1.L)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
xla00537
]
Others
378666 (cntn1.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
V-set
Ig_DSCAM-DSCAML_C
Ig_5
Pur_ac_phosph_N
C2-set_2
Tissue_fac
Receptor_2B4
Motif
Other DBs
NCBI-GeneID:
378666
NCBI-ProteinID:
NP_001079338
Xenbase:
XB-GENE-866088
UniProt:
P79921
A0A974HT14
LinkDB
All DBs
Position
3L:complement(71898764..71945642)
Genome browser
AA seq
1005 aa
AA seq
DB search
MWPLVTQLVIYFFFCWAEEGKRYGPVFEEQPIDTIFPEESTEGKVSVNCRARGNPPPIYK
WRKNNLEIDLLNEHYSLVGGNLVINNPDKYKDSGRYVCIVSNIYGKVWSREATLNFGYLD
PFPTEERYEVKVKEGTGAVLICDPPPHVPDDLNYRWLLNEFPVFLSPDNRRFVTQTNGNL
YIAKVEHLDRGNYSCFVSSPSVTKSVFSKFISLLPQTDTSEKPKRYTPVINVKFKDTRAL
KDQNVTLECFALGNPVPVITWRKINEAMPASADISMSGAVLKIFNVQPEDEGTYECEAKN
IKGLDNHRAYVYVEGVPEWVEHINDTERDIGSDLHWACVARGKPQPSIRWLKDGAPYGKG
DIIKKGLTLEDAGMYQCIAENIHGIIYANAELKILALAPTFEFTPMRKKVLAAKGGRVII
ECKPKAAPKAKFSWSKGTELLINNSRVSIWDDGSLEITNITKFDEGSYTCFAENDRGKAN
STGIVSVTAATKITLAPSNADVTVGENATMQCHASHDPTLELTFIWALNGFPIEFDKEDG
HYERAIRNVVGSELVIKNAQLIHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGVRVEE
IRDTSVKLTWSSGTDNHQPISKYNIQAQNILSEDWKDVKTENPNIEGNMEMARVIDLIPW
MDYEFRVIATNTLGVGEPSLPSPKIRTEGAAPIVAPAEVGGGGGSNRELTITWQPLSREY
HYGDGFGYGVAFKPFNGREWRKVIVTNPESGHYVHKDDTITPATQFQVKVKAFNKIGEGP
YSSTVVVYSAEDVPTEAPTAVVYNILSSSEVSVAWHPVYEKSIEGYQVRYWRIQDKEAAA
HRVQVKASDITTRLEGLMPNTHYNIEVRAFNSAGDGPPSKTLTFLTKKAPPSQIPQITSA
VRYGSQYIITWEHVVPLSNESAVNGYKVLYRQDGQRDGKLYSTRKHSVELPVPEEGVYVV
EVRAHSEGGDGAVGFITISGVATGILPSVLGVLLPILSLLMYLEF
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atgtggcctctagtaacccaactggtgatctacttcttcttctgctgggcggaggaagga
aaaagatatggacctgttttcgaagaacaaccaattgacacaatttttcctgaagaatct
acagaaggcaaagtctcggtgaactgcagggctcgaggaaaccctcctcctatttacaag
tggagaaagaataatttggagattgaccttcttaatgagcattacagtttggtgggcggt
aatcttgtcatcaacaatccagacaagtacaaagattctgggagatatgtttgcattgtc
tcaaatatttatgggaaagtctggagtagagaagccactttgaattttggatatctggat
ccatttcctacggaggaacgctatgaagtaaaagtgaaagaaggaactggagcagttcta
atatgtgatccccctccacacgtccctgatgatcttaattatcgctggcttttaaatgaa
tttcctgtgttcctttcacctgataacagaagatttgttacacagacaaatggaaatttg
tatattgcaaaagttgagcatttggaccgaggcaattactcatgttttgtttccagtcct
tctgttacaaaaagtgtattcagcaaatttatttcacttcttccacaaactgacacttca
gagaaacctaaacggtatacacctgttattaatgtcaaatttaaagatacacgggccctt
aaagatcaaaacgtcacactggagtgttttgctttgggaaatcctgttcctgtaatcaca
tggagaaaaataaatgaagcaatgccagcttcagctgatataagcatgtctggggctgtc
ctaaaaattttcaatgtccaacctgaagacgaagggacatacgaatgtgaagctaagaac
attaaagggctggacaaccatagagcatatgtatatgtagaaggtgtgccagaatgggta
gaacacatcaatgatacagaaagagatataggcagtgatttgcattgggcctgtgttgct
agaggcaagccacagcctagcattagatggctaaaagatggagcaccgtatggaaagggt
gacataataaagaaaggattgactctggaggacgccggaatgtatcagtgcatagcagaa
aatatacacggaattatttatgcaaatgcagaactgaagattcttgctttagcaccaaca
tttgaatttactcctatgagaaagaaagttttagctgccaaaggaggccgtgtaatcatt
gagtgcaagccaaaagctgctccaaaagccaaattttcatggagtaagggaacagaactg
ctaataaacaacagtcgagtatcaatatgggatgatggtagcctggaaattacaaacatt
acaaaatttgatgaaggcagctatacttgttttgcagaaaatgacaggggaaaagcaaat
agcactggaatagtttctgtcacagctgccacaaagataacccttgcaccttcgaatgct
gatgtgactgttggtgaaaatgcaaccatgcagtgtcatgcatctcacgatcccacattg
gagcttacatttatctgggctttaaatggctttcctattgaatttgacaaggaagatgga
cattatgaacgggcgatacggaatgttgtgggcagcgaactcgttataaaaaatgcacaa
ctaatacatgccgggagatacacttgcacagcacaaacaattgttgacaattcctcagct
tcagctgatcttgtagtcagaggtccccctggtcctcccggtggagtcagagtagaagaa
ataagagatacttccgtaaaattaacatggagtagtggaacagacaatcaccagccaatt
tccaagtataatattcaggcgcaaaatattttgtctgaagattggaaagatgtaaagaca
gaaaatccaaacattgaaggaaatatggagatggcaagagttatagatttgattccttgg
atggactatgaattccgggttatagcaacaaacacgttaggagttggagaacctagtttg
ccatcaccaaaaattagaacagagggagctgcacctattgtagctcctgcagaagttggg
ggtggtggtggaagcaatcgggagttaacaataacatggcagcctttatcacgtgaatat
cattatggcgatggctttggctacggtgtcgccttcaagcccttcaatggcagggaatgg
agaaaagttattgttacaaaccccgaaagcggtcactatgtacacaaggatgacaccata
actccagcaacacagtttcaagtaaaagtaaaggcctttaataaaatcggtgaaggtcca
tacagcagcactgttgtagtatactcagcagaggatgtgcctacagaagccccaacagca
gtggtatacaatatattgtcatcttctgaagtatctgttgcctggcacccagtttatgag
aagtctattgaaggttaccaggttcgctactggcgaattcaagacaaagaagcagcagca
catcgagtacaggtgaaagcttcagatattacaaccaggcttgaaggattgatgccaaat
acccattacaacatagaagttcgggcttttaatagcgcaggggatgggccaccaagcaaa
acactaacgttcttaacaaagaaagctcctccaagccagataccacagattactagtgct
gtgagatatggctcacagtatattatcacctgggaacatgtagtacctttatccaatgaa
tcggctgtgaatggttacaaggttctttacaggcaagatgggcagagagatggaaagctg
tattcaacaagaaaacattcagtagaattacctgtcccggaagaaggagtatatgttgtt
gaggttcgagctcacagtgaaggaggtgatggagcagttggtttcattacaatttctggt
gttgcaacaggaattctcccctctgttcttggagttcttctgccaatcctaagcctgctg
atgtatttggaattttga
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