KEGG   Xenopus laevis (African clawed frog): 379092
Entry
379092            CDS       T01010                                 
Symbol
syf2.S, syf2
Name
(RefSeq) pre-mRNA-splicing factor syf2
  KO
K12868  pre-mRNA-splicing factor SYF2
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:xla00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    379092 (syf2.S)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:xla03041]
    379092 (syf2.S)
Spliceosome [BR:xla03041]
 Complex B
  Other components
   Prp19-related factors
    379092 (syf2.S)
 Complex C
    379092 (syf2.S)
SSDB
Motif
Pfam: SYF2
Other DBs
NCBI-GeneID: 379092
NCBI-ProteinID: NP_001079405
Xenbase: XB-GENE-920851
UniProt: Q8AVQ6
LinkDB
Position
6S:complement(29951780..29964744)
AA seq 240 aa
MDKEKAEVSPEEESAPASAEDLAAQKREARLRKFRELHLKTNEARKLNHQEVVEEDKRQK
LPSNWEARKARLEWELKNEEKKRECAANGVDFERAKLLEISAEDAERWERKKKRKNPDLG
FSDYAAAQLRQYQRLTKQIKPDMEEYEMEKEKQGELFYPTSDSLYHGTHVPSQSGIDRMV
TDLEKQIEKREKYSRRRAYNDDADIDYINERNAKFNKKAERFYGKYTAEIKQNLERGTAV
NT seq 723 nt   +upstreamnt  +downstreamnt
atggataaagagaaggcagaggtttcccctgaggaagagtctgctccagccagtgctgag
gatttggctgcccaaaagagagaagcaagattaagaaaatttcgagagttgcacttgaaa
acgaatgaggctcgaaagctaaatcatcaagaagtggtagaagaagacaaacgacagaag
ttgcctagtaactgggaggcacggaaagcccggttagaatgggagctcaaaaacgaagag
aagaaaagggaatgtgcagctaatggtgttgactttgagcgggcaaagcttttggaaata
agtgcagaagatgctgaaaggtgggagaggaaaaagaaaagaaaaaatcctgacttggga
ttttcagactatgcagcagcacagctacgccaatatcagaggctgacaaagcaaattaaa
ccagacatggaagaatacgagatggaaaaagagaaacaaggtgaactgttctaccccaca
tcggacagcttgtaccatgggactcatgtaccctcccaatctgggatcgacagaatggtc
acagatcttgaaaaacagattgaaaaacgtgaaaaatacagccgcaggcgcgcctacaac
gatgatgctgatattgactacattaatgagaggaatgcgaaattcaacaagaaggcggag
agattttatggcaaatatactgccgagatcaaacagaacttggaaagaggaactgctgtc
tga

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