KEGG   Xenopus laevis (African clawed frog): 379121
Entry
379121            CDS       T01010                                 
Symbol
lsm14a.S, fam61a, lsm14a, lsm14a-a, lsm14a-b, rap55, rap55a, RAP55A-B
Name
(RefSeq) protein LSM14 homolog A-B
  KO
K18749  protein LSM14
Organism
xla  Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:xla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xla03019]
    379121 (lsm14a.S)
Messenger RNA biogenesis [BR:xla03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     379121 (lsm14a.S)
SSDB
Motif
Pfam: LSM14 SM-ATX FDF
Other DBs
NCBI-GeneID: 379121
NCBI-ProteinID: NP_001079434
Xenbase: XB-GENE-6251640
UniProt: Q8AVJ2
LinkDB
Position
4S:complement(49469754..49487019)
AA seq 471 aa
MSGGTPYIGSKISLISKAEIRYEGILYTIDTENSTVALAKVRSFGTEDRPTDRPIPPRDE
VFEYIIFRGSDIKDLTVCEPPKPQCSLPQDPAIVQSSLGSSSASSFQSVSSYGPFGRMPT
YSQFSTSPLVGQQFGAVAGSSLTSFGAETTSSTSLPPSSVVGSTFTQEARTLKTQLSQGR
SSSPLDSLRKSPTIEQAVQTASAPHPPSSAAVGRRSPVLSRPLPSSSQKTAESPEQRKGE
LHKIQRPDTEQKNDYKNDLSRRQPVLSAAQPRRGRGGNRGGRGRFGVRRDGPMKFEKDFD
FESANAQFNKEDIDREFHNKLKLKDDKPEKPLNGEDKTDSGVDTQNSEGHAEEEDVLAAG
VCYYDKTKSFFDSISCDDNRDRRQTWAEERRMNAETFGLPLRSNRGRGGYRGRGGGMGFR
GGRGRGGERRGAPGGVGGFGPSRGYRGGSRGGRGGREFAEYEYRKDNKVAA
NT seq 1416 nt   +upstreamnt  +downstreamnt
atgagcgggggtactccatacatcggtagtaagatcagcctgatctccaaggctgaaatc
cgatatgaaggcattttatatactatcgacacggaaaactctacagtagctctcgctaaa
gttcgatccttcggaacagaggaccggccgactgaccgacccatacctccccgagatgaa
gtatttgaatatattattttccgtggaagtgatattaaagaccttactgtctgtgagcca
cccaaacctcagtgttccttgcctcaggaccctgccattgtacagtcttcattagggtcc
tcctctgcttcctcgttccagtctgtgagctcttatgggccatttggcagaatgcctaca
tacagtcagtttagcacaagtcctcttgtggggcagcagtttggtgctgttgcaggtagt
tctttgacctcttttggagcagaaacaacaagcagcacatctttacccccaagcagtgtt
gttggatccactttcacgcaggaggcaagaactttaaaaacacagttatcccaaggtcga
tcaagttccccattagattccttaagaaagagcccaaccattgaacaagctgtgcagact
gcatcagcccctcaccccccatcctccgctgctgtaggcagaagaagccccgttctgtct
agacccttaccatcctcaagccaaaaaactgctgagagtcccgaacaaaggaaaggtgaa
ctacacaaaatccagaggccagacacggagcaaaaaaacgattacaaaaatgacctgagc
aggagacaaccagttttaagtgctgctcagcctaggagaggtcgagggggaaatcgaggt
ggtcgtggaagatttggagttagaagagatggacctatgaaatttgaaaaagatttcgac
tttgaaagtgctaatgcacagtttaacaaagaggacattgacagagaatttcataataaa
ctgaaattaaaagatgataaacctgagaagccattaaacggagaggataaaaccgattct
ggagttgacacgcagaacagtgaaggccatgcagaggaggaggatgtattggctgctgga
gtttgctactatgataaaaccaaatctttctttgatagcatctcctgtgatgataatagg
gatagaagacagacgtgggcagaagaaagaagaatgaatgctgaaacatttggcctccct
ctccgttcaaacagaggtcgtggtggttacagagggagaggtgggggtatgggcttccgt
ggagggagaggccgtggcggagagaggagaggtgcaccaggaggtgttggtggctttgga
ccttctcggggttaccgtggtggttccagaggaggcagaggtggtagggaatttgcagaa
tatgaatacagaaaagacaacaaagtagcagcctag

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