Xenopus laevis (African clawed frog): 379141
Help
Entry
379141 CDS
T01010
Symbol
taf1b.L, taf1b, TAFI63
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xla03021
]
379141 (taf1b.L)
Transcription machinery [BR:
xla03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
379141 (taf1b.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Rrn7_cyclin_N
Zn_ribbon_RRN7
HobA
Motif
Other DBs
NCBI-GeneID:
379141
NCBI-ProteinID:
NP_001079454
Xenbase:
XB-GENE-992279
UniProt:
Q32N22
A0A974CWD5
LinkDB
All DBs
Position
5L:148901528..148963008
Genome browser
AA seq
582 aa
AA seq
DB search
MEAEDGRGYNVPCPQCSEINWAISDEGRYYCMSCHTIIEKTREVEDSEVFVNLGKIQYIS
RGLRKKRKQEKGWEWYVCEGFQFILIKQAESLQALGVAPQIKDEIICTFWRRYLQKTNQA
YVKRPVYRNTLNLRESDSSATELDSETDEFSDGITTDASDRLSVATEDIASGSESAVSIQ
SGSVDGVSHTKMSKNWKPWNYVKMSMPMTLAFCYLALLWLRASITLSDLLRFVFEKRIPY
FNAHQYLPEEIKLYGQDVRIFRMQSFPVYNDILNKAYELGHYLDLPRFPEIIKNCYLHPN
VLCMKYLMEANLPDELHHWTCQVAEKTGTDDLHLLTFDPACKKARHIRYDVQAVALIIVV
LKLLFALDDNTEWQLSTFAERMNQRDKEKPIFEFQSWYQTVRSCYEKAQQALEEEYGRFT
WKSDCLLYYSHTSKAVLQKRKQMSENLHRQFSKLAGAAPDTGKQGPSSFLFKWDEQNTDR
ICFHGHSLEAILQQGDKPATAINTHYWLNSLKKCKSRICQHSELYEQSNFPRSYHFIVSL
FAFLLRVEHCVVHHEVCLIEETFFQEFQGKKNKQKQKPRKQN
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggaagcggaagatgggagaggctacaatgtgccttgcccacaatgttctgagatcaac
tgggcaataagtgatgagggcaggtactactgtatgagctgtcacactatcatagagaaa
accagagaagttgaagattcagaagtatttgtaaaccttggcaaaattcagtatatctct
agaggcctccgaaaaaagagaaaacaagagaagggctgggagtggtacgtttgtgaagga
tttcagttcattctcattaagcaagctgaatcactgcaggccttgggagtggcccctcaa
attaaggatgagatcatctgtacattctggaggcgttatcttcagaagacaaatcaggca
tatgtcaaaaggccagtttacagaaacactctgaatcttagagaatcggacagcagtgct
actgagctagatagtgagacagacgaattttctgatgggattaccactgatgctagtgat
aggctgtctgtcgcaactgaggacatcgcctctggatcagaaagtgcagtgagcatacag
tctggctctgtagatggtgtgtcacacacgaagatgagtaaaaattggaaaccatggaat
tacgtaaagatgtccatgcctatgacgttggcattctgttatcttgctttgctgtggctg
agagcttctataacactctctgatttattacgatttgtttttgaaaaacgcattccatac
ttcaatgcacatcaatatctgccggaagaaataaaactatatggacaagatgtcagaata
ttccgaatgcagtcctttccagtttataatgatatactgaacaaggcttatgaacttgga
cactatttggatttgccgcggttccctgaaataattaaaaattgttatttacaccccaat
gttctatgtatgaagtatctgatggaagccaacctgccagatgaactacaccactggaca
tgccaggtagcagagaagacgggaactgatgatttgcatctgttgacatttgatcctgca
tgtaaaaaagcacggcatatccgctatgatgtgcaagcagtggctttaataatagtcgtg
ctgaaactgttatttgcactggatgataatacagaatggcagttgtcaacgtttgccgaa
agaatgaaccaaagggacaaagagaaaccaattttcgaattccaaagctggtatcaaaca
gtgaggtcgtgctatgagaaagcccagcaggcgctggaggaagaatatggcaggttcacg
tggaaaagtgactgcctgttgtattactctcacacttcaaaagctgtgcttcagaagaga
aaacagatgtcagaaaacctgcacaggcagtttagcaagctggctggagctgcacctgac
actggcaagcaaggcccatcaagtttcttgtttaaatgggatgagcaaaacacagacagg
atttgttttcatggacacagcctagaggccattctgcagcaaggcgacaaaccagctaca
gcaataaacactcattattggttgaactcactgaagaaatgtaaatccaggatttgccag
cactccgagctatacgaacaatccaactttcctaggagctaccactttatcgtgtccctg
tttgccttcctgctgagagtggaacattgtgtcgtccatcatgaagtgtgccttatagaa
gaaacattttttcaggagtttcaagggaagaagaataaacagaaacaaaagcccagaaaa
caaaattaa
DBGET
integrated database retrieval system
