Xenopus laevis (African clawed frog): 379155
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Entry
379155 CDS
T01010
Symbol
rbm26.S, rbm26
Name
(RefSeq) RNA-binding protein 26
KO
K13192
RNA-binding protein 26
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xla01009
]
379155 (rbm26.S)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xla03019
]
379155 (rbm26.S)
03041 Spliceosome [BR:
xla03041
]
379155 (rbm26.S)
Protein phosphatases and associated proteins [BR:
xla01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
379155 (rbm26.S)
Messenger RNA biogenesis [BR:
xla03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
379155 (rbm26.S)
Spliceosome [BR:
xla03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
379155 (rbm26.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup35_RRM_2
RRM_1
PWI
RRM_Nup35
zf-CCCH
zf_CCCH_4
Motif
Other DBs
NCBI-GeneID:
379155
NCBI-ProteinID:
NP_001079468
Xenbase:
XB-GENE-960059
UniProt:
Q2T9I5
LinkDB
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Position
2S:116268774..116319891
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AA seq
1059 aa
AA seq
DB search
MIIEDFEALKHWLSKTLEPICDADPSALAKYVLALVKKDKSDRELNALCIDQLDVFLQKE
TQGFVDKLFDAINTKSYLPQPDSTSTAVVKLDSFEHQEKEIKKDEVNKEEEKEKKAPRRL
NQSPQPSSTRHKDTRENRKRSNSDRESNSIQNSFRSGLPEQKQDVDAAPPRLNSNKVQNA
KNTRSRDDRKRDDRFRKREYDRNVPRRDSYRDRYNRRRGRSRSYSRSRSRSWSKERQRDR
DRSRSRTRSRDKDSGKPKFDLDRPDPVDNSYASGSSVPHIGSAHFPVPTLSSTITVITPS
HHGNSSAENWPEFHEDQVDHSSYGRLQMQKKRCRDYDEKGFCMRGDMCPFDHGSDPVVVE
DVNLPGILPFPAPPPVLEGPPPPGLPPPPSLLTPPPVNLQPPPVPPPGPLPPSLPPVTGP
PPPLPPLQPAGMDAPPNSATSSVPTVVTTGILHPPPVPPSSLFPSAAAAAGPIPLFPETY
EADGYNPEAPSMTTTSRPLYRHRVHAQRPNLIGLTSGDMDLPTPREKNNMRIVVDSESRK
RNLGSGDCVLPSKKPWFDKSNFNNRMNPGFQKKPLFPNENTKLELRRIPPELNNISKLNE
HFSKFGTIVNLQVAYKGDPEGALIQFATHGEAKKAISSTEAVLNNRFIRMYWHREGSSQQ
LQTPGLPKVVHLTVPQQPNLSVMKQSIKERLGPVPANNSEPSVAQNINTETIQNIAKVPV
KERLGYMSKTVSAATEKVFSTSTGLTKTVYNPAALKAMQKSVLYPICNDNGDAQKKKQEA
LKLQQDVRKKKQEILEKRIETQKILISKLEKNKNMKSEDKAEILKTLETLTNSITKLRDE
LKAVSSTGNVVKNNKSKAQMQKELLDTELDLYNKIQAGDDVTELRKKYTELQLDAAKRGI
LSSGRGRGVHLRGRGVIRGRGRVLHGRGRGASVHAVVDHRPRALKISGFTEGDREYLLPH
FAHFGEIEDCQIDDSSLHAIITFKTRAEAEAAAVHGAQFKGQDLKLAWNKPVPNASSTEV
EDADQEEEEFHEDSIVDDSLLQDDDEEEEDDNESRSWRR
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgatcatagaggattttgaggcgttgaaacattggttgtcaaagactctagagccgatt
tgtgatgctgacccatcagctcttgcaaaatatgtacttgcattagtgaagaaagacaaa
agtgaccgagagctaaatgctttatgcattgaccaacttgatgtatttctacaaaaagag
acacagggctttgttgacaaactgtttgatgccataaacaccaagagttatcttccacaa
cctgatagcacctcaacagctgttgtgaaattggactcatttgaacatcaagaaaaagaa
atcaagaaagatgaggtaaacaaagaagaagaaaaagaaaagaaggcacctaggagatta
aaccaaagccctcagccttctagcacccgtcacaaagataccagggaaaacagaaaaaga
agtaactccgatcgagaaagcaactccatacaaaattcctttagatcaggtctcccagag
cagaagcaggatgtagatgcagcaccgccacgtttaaatagtaacaaagttcagaatgca
aaaaacacaaggagtagagatgatcgaaagagagatgatcgttttcgtaaaagggagtat
gacaggaatgtacctcggagagattcgtacagagatcggtataacagacgtagaggtaga
agtcgcagttacagcagaagccgaagtcgcagctggagtaaggagaggcagcgtgataga
gacaggagtcgtagcagaacaagaagtagagacaaggattctggaaagccaaagtttgat
cttgatagaccagatccagtagacaacagttatgcatcaggatcttctgttcctcacatt
ggatctgcacattttccagttccaactctaagcagtacaattacagtaattactccatcc
catcatggcaacagctcagctgaaaactggccagaatttcatgaagatcaagtggaccac
agtagttatggcagactacagatgcagaaaaaacgatgcagagactatgatgaaaaggga
ttttgcatgagaggggatatgtgtccttttgatcatggtagcgatccagttgttgtcgaa
gatgtaaacctacctggaatactaccattcccggcaccgcctcctgtcttagaaggacct
cctccaccaggccttcctcccccaccatctcttttaacacctccccctgtaaacttgcaa
cctcctcctgttccgccacctggtccacttcctcccagccttccgcctgtcacaggacca
ccaccacctcttccacctttgcaaccggctggtatggatgctccccctaattctgcaacc
agttcagttcctaccgttgtcactacaggcattcttcatccacctcctgtgccaccttct
tctctcttcccatccgcagcagcagcagcagggcccattcctttgtttccagagacatat
gaagcagatgggtataatccagaagcaccaagcatgactactacatcaagacctctatac
cgccatcgtgtacatgctcaaagacctaatttgattggcctaacttcaggagatatggat
ttgcctactccacgagagaaaaacaatatgaggatagttgtggattctgagtctcggaaa
agaaatcttggatcaggggattgtgttttaccttccaaaaaaccatggtttgacaaatca
aacttcaacaacagaatgaatcctggctttcaaaaaaagcccctgtttccaaatgaaaac
actaaacttgaattaagaagaattccacctgaacttaacaacatcagcaaacttaatgaa
catttcagtaaatttggaaccatagtgaatctgcaggttgcttacaagggggacccagaa
ggtgctcttattcaatttgctactcatggagaagcaaagaaagcaatatctagcacagaa
gctgtgttaaataacagatttattaggatgtactggcacagagaaggctcttctcagcaa
ttacagactccaggcttgccaaaggttgtacatctgacagttccacaacaacccaattta
tcagtcatgaagcaatctataaaggagcgtctaggaccagttccagcaaacaattcggag
ccatctgtggcccagaatattaacacagagaccattcagaatatagccaaagtacctgtt
aaagagagattgggttatatgtccaaaactgtttctgcagctacagaaaaggttttttcc
acatctacaggactcacaaaaacagtttacaaccctgcagctttaaaggcaatgcaaaaa
tcagttttgtatcctatttgcaatgataacggtgatgcacagaaaaaaaaacaggaagct
ctaaaacttcagcaagatgtaaggaagaaaaagcaggagatactagagaaacgcatagaa
acacaaaagattcttatatcaaagctagagaaaaataagaatatgaagtctgaagacaaa
gcggaaattttgaaaacactggagactttgactaacagtattacaaaattaagggatgaa
ctgaaagcagtttcttcaacaggcaatgtcgtaaagaataataaaagcaaagctcagatg
caaaaagaacttttggacacagagctggacttgtacaacaaaattcaagctggggatgat
gttacagaactacgaaagaagtatactgagctgcagcttgacgctgcaaagcgtggcatt
ctgtcatctgggcgtggccgaggagttcatttgagaggacgaggtgtgataaggggaaga
ggtcgggtattgcatggcagaggtagaggagcatctgtacatgccgtggtggatcatcgc
ccaagagccttaaagatatctggttttactgaaggcgacagggaatatcttttgccccac
tttgcacattttggtgaaatagaagactgccagatagacgactcttcacttcatgcaata
ataacattcaagactagagcagaagcagaagctgctgcagttcatggggcacaattcaaa
gggcaggatttaaagctagcgtggaacaaaccagtgccaaatgcatctagtactgaagta
gaagatgctgatcaagaagaggaagaatttcacgaagactccatagtagatgactccttg
cttcaagatgatgatgaagaagaagaggatgataatgagtcccgttcttggaggagatga
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integrated database retrieval system
