KEGG   Xenopus laevis (African clawed frog): 379210
Entry
379210            CDS       T01010                                 
Symbol
tuba5.S, tuba2, tuba3c, tuba3c.S, tuba3d
Name
(RefSeq) tubulin alpha 5 S homeolog
  KO
K07374  tubulin alpha
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla04145  Phagosome
xla04210  Apoptosis
xla04517  IgSF CAM signaling
xla04530  Tight junction
xla04540  Gap junction
xla04814  Motor proteins
xla05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:xla00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    379210 (tuba5.S)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    379210 (tuba5.S)
  09143 Cell growth and death
   04210 Apoptosis
    379210 (tuba5.S)
  09144 Cellular community - eukaryotes
   04530 Tight junction
    379210 (tuba5.S)
   04540 Gap junction
    379210 (tuba5.S)
  09142 Cell motility
   04814 Motor proteins
    379210 (tuba5.S)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    379210 (tuba5.S)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xla03019]
    379210 (tuba5.S)
   03036 Chromosome and associated proteins [BR:xla03036]
    379210 (tuba5.S)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:xla04812]
    379210 (tuba5.S)
   04147 Exosome [BR:xla04147]
    379210 (tuba5.S)
Messenger RNA biogenesis [BR:xla03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     379210 (tuba5.S)
Chromosome and associated proteins [BR:xla03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     379210 (tuba5.S)
Cytoskeleton proteins [BR:xla04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    379210 (tuba5.S)
Exosome [BR:xla04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   379210 (tuba5.S)
  Exosomal proteins of other body fluids (saliva and urine)
   379210 (tuba5.S)
  Exosomal proteins of colorectal cancer cells
   379210 (tuba5.S)
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 379210
NCBI-ProteinID: NP_001079523
Xenbase: XB-GENE-5788976
UniProt: Q7ZTP0 A0A974DH65
LinkDB
Position
2S:<64710870..64716585
AA seq 450 aa
MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLESAVIDEVRNGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLE
RVRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYSPIISAEKAYHEQLSVSEITNACFEPSN
QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIAAIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPNGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGTDSTEGDDDEGEEY
NT seq 1353 nt   +upstreamnt  +downstreamnt
atgcgtgagtgtatatctgtccatgttggccaggctggagttcagatcggtaatgcatgc
tgggagctttactgcctagaacatgggatccaaccagatggtcagatgcctagtgataaa
acaattggaggtggagatgattccttcaatactttctttagtgagactggagcaggcaaa
catgtaccgagagcagtatttgtagacctggaatctgcagtcatagatgaggttcgtaat
gggacatataggcagctctttcaccctgagcagcttataactggtaaggaggatgctgcc
aataattatgcacgtgggcactacactgtaggaaaagagatcattgacctggtactggaa
agagttcggaaactggctgaccaatgcacaggtcttcaaggctttctgattttccacagc
tttggaggaggaacaggatctggatttacatccttgcttatggagaggctatctgtggat
tatggcaagaagtccaagctggaatttgccatctatccagcccctcaagtgtcaacagct
gtagttgagccctataattcgattcttaccacacacactacactggagcactctgactgt
gcatttatggtggataatgaggcaatttatgacatatgtaggcggaatctggacattgag
cgtccatcctacaccaatttgaaccgtcttattggccagatagtctcttctatcacagcc
tccttacgctttgatggggccctcaatgtggacttaacagaattccagaccaatttggtt
ccatatccacgtatacacttccctcttgtaacttactctcccataatttccgctgagaag
gcgtaccatgagcagctctctgtgtctgaaatcacaaatgcctgttttgagccatctaac
cagatggtaaaatgtgaccctcgacatggcaagtacatggcctgctgcatgttataccgt
ggagatgttgttccaaaggatgtgaatgctgcaattgcagcaatcaagaccaaacgtact
atacagtttgtggactggtgcccaacaggttttaaggtgggaataaattaccagccacct
accgtggttccaaatggtgatctcgctaaagtgcagcgtgcggtctgtatgctcagcaac
acaaccgctattgctgaagcctgggcacgcctggaccataagtttgaccttatgtatgcg
aaacgagcttttgtgcattggtatgttggtgaaggcatggaggagggtgaattttctgag
gcacgagaagatcttgctgctttagaaaaggattatgaggaagtgggcacggactctact
gagggagatgatgatgaaggagaggaatattaa

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