Xenopus laevis (African clawed frog): 379210
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Entry
379210 CDS
T01010
Symbol
tuba5.S, tuba2, tuba3c, tuba3c.S, tuba3d
Name
(RefSeq) tubulin alpha 5 S homeolog
KO
K07374
tubulin alpha
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04145
Phagosome
xla04210
Apoptosis
xla04517
IgSF CAM signaling
xla04530
Tight junction
xla04540
Gap junction
xla04814
Motor proteins
xla05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
379210 (tuba5.S)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
379210 (tuba5.S)
09143 Cell growth and death
04210 Apoptosis
379210 (tuba5.S)
09144 Cellular community - eukaryotes
04530 Tight junction
379210 (tuba5.S)
04540 Gap junction
379210 (tuba5.S)
09142 Cell motility
04814 Motor proteins
379210 (tuba5.S)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
379210 (tuba5.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xla03019
]
379210 (tuba5.S)
03036 Chromosome and associated proteins [BR:
xla03036
]
379210 (tuba5.S)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xla04812
]
379210 (tuba5.S)
04147 Exosome [BR:
xla04147
]
379210 (tuba5.S)
Messenger RNA biogenesis [BR:
xla03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
379210 (tuba5.S)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
379210 (tuba5.S)
Cytoskeleton proteins [BR:
xla04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
379210 (tuba5.S)
Exosome [BR:
xla04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
379210 (tuba5.S)
Exosomal proteins of other body fluids (saliva and urine)
379210 (tuba5.S)
Exosomal proteins of colorectal cancer cells
379210 (tuba5.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
379210
NCBI-ProteinID:
NP_001079523
Xenbase:
XB-GENE-5788976
UniProt:
Q7ZTP0
A0A974DH65
LinkDB
All DBs
Position
2S:<64710870..64716585
Genome browser
AA seq
450 aa
AA seq
DB search
MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLESAVIDEVRNGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLE
RVRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYSPIISAEKAYHEQLSVSEITNACFEPSN
QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIAAIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPNGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGTDSTEGDDDEGEEY
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtgtatatctgtccatgttggccaggctggagttcagatcggtaatgcatgc
tgggagctttactgcctagaacatgggatccaaccagatggtcagatgcctagtgataaa
acaattggaggtggagatgattccttcaatactttctttagtgagactggagcaggcaaa
catgtaccgagagcagtatttgtagacctggaatctgcagtcatagatgaggttcgtaat
gggacatataggcagctctttcaccctgagcagcttataactggtaaggaggatgctgcc
aataattatgcacgtgggcactacactgtaggaaaagagatcattgacctggtactggaa
agagttcggaaactggctgaccaatgcacaggtcttcaaggctttctgattttccacagc
tttggaggaggaacaggatctggatttacatccttgcttatggagaggctatctgtggat
tatggcaagaagtccaagctggaatttgccatctatccagcccctcaagtgtcaacagct
gtagttgagccctataattcgattcttaccacacacactacactggagcactctgactgt
gcatttatggtggataatgaggcaatttatgacatatgtaggcggaatctggacattgag
cgtccatcctacaccaatttgaaccgtcttattggccagatagtctcttctatcacagcc
tccttacgctttgatggggccctcaatgtggacttaacagaattccagaccaatttggtt
ccatatccacgtatacacttccctcttgtaacttactctcccataatttccgctgagaag
gcgtaccatgagcagctctctgtgtctgaaatcacaaatgcctgttttgagccatctaac
cagatggtaaaatgtgaccctcgacatggcaagtacatggcctgctgcatgttataccgt
ggagatgttgttccaaaggatgtgaatgctgcaattgcagcaatcaagaccaaacgtact
atacagtttgtggactggtgcccaacaggttttaaggtgggaataaattaccagccacct
accgtggttccaaatggtgatctcgctaaagtgcagcgtgcggtctgtatgctcagcaac
acaaccgctattgctgaagcctgggcacgcctggaccataagtttgaccttatgtatgcg
aaacgagcttttgtgcattggtatgttggtgaaggcatggaggagggtgaattttctgag
gcacgagaagatcttgctgctttagaaaaggattatgaggaagtgggcacggactctact
gagggagatgatgatgaaggagaggaatattaa
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integrated database retrieval system