Xenopus laevis (African clawed frog): 379232
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Entry
379232 CDS
T01010
Symbol
pms1.S, pms1
Name
(RefSeq) postmeiotic segregation increased 1
KO
K10864
DNA mismatch repair protein PMS1
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xla03400
]
379232 (pms1.S)
DNA repair and recombination proteins [BR:
xla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
379232 (pms1.S)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
HATPase_c_3
HMG_box
HATPase_c
HMG_box_2
HMG_WDHD1
IL5
Pox_D2
Motif
Other DBs
NCBI-GeneID:
379232
NCBI-ProteinID:
NP_001079545
Xenbase:
XB-GENE-959887
UniProt:
Q7ZXV9
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Position
9_10S:82279980..82328818
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AA seq
925 aa
AA seq
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MHHLPSATIHLLSSSQVITSVVSVVKELVENALDASATSIEIKLENFGFDKIEVRDNGKG
IKHDETSVMGIKHYTSKINSHEDLETLETYGFRGEALASICCVAEVHITTKTLADEFSKL
YVLDSSGHVVSQKPSHLGQGTTVSVHKLFKNLPVRKQYYSTNKKCKEEIKKIQELLMAYG
IIIPDLRILFTHNKALVWQKSKVSDHKMAFMSVVGSATMNGMVPFQYQSEAPEISINGYL
PKPDADITVTSLSSSEKSFLFINRRPVYHKEIMKMVRLYHTQSLNKGSPRCYPVFFMNIV
LPASCLDVNLTPDKTKIMLQNKESVLLAVENVLRSVYPDSQILETDKDKMPEDTVTHNTD
NSNTHVVENKITGCGGKSLSVCPSFLNSVQEQKQSVNSLQPQTFNKDTIFYSDNAEVAYS
ENETFDGFLVPTESSNTQDEAIADTGLHFAVSHSNSMDTESLNPIDSVHQVSEKDTFKKT
TLINVPDIVDDIWSKGSAFKDSLGDNLEPVKLLNLSTETHFDKNTGEASNVQNSKDTNNK
LNVISGKSGFVTAYDLISKRAIKKPLSAEEHFIQAERSKLIDDNPLASVEEISSKGKDLW
GKLNQEEKFNYEEKAAKDLERYNLQMATATREHVEKQKDSEKRQKMSSRPSPTRKVTLKT
PLSNQQILDKLFQSQEKKKSKPPISSVQVAFKLSMLKQRISKLTNPQNSVEEDFCLINKL
SFPGAWIVASKSKIALLNPYRAEEALIFKRLLKNHKIPAEKLESPIVLTDSLLGGSPYLD
ALLSMQKDPPKLNGETYFSDPRLTANGFLIKIVPGKSAVEKHIEIEGMASSLPFYGVSDL
KEILSSVPIKKSNELCDYRPIKVWNYLEGEAVRLSRQLPLNLSKEDVQDIMHRVKNQLGS
ETKACLHGHQFFHHLSDLPKTEEPC
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgcatcacttaccatcagctacaatccacttgctttccagttcccaagtaattacctca
gtggttagtgtggtaaaggaactagtagaaaatgccttagatgctagtgcaaccagcatt
gaaattaagttggaaaattttggatttgacaaaattgaagttcgggacaatggaaaaggt
atcaaacatgacgaaacctctgtcatgggcatcaagcactatacttctaaaattaacagc
catgaagacttggaaacattagaaacatatggtttccgtggggaagctctagcttcaatc
tgctgtgtggcagaggttcatattactacgaagactcttgcagatgagttcagcaagctg
tatgtcttagatagcagtggtcatgttgtttcccaaaagccttcccatcttggtcagggt
actactgtcagtgtgcataaactgttcaagaatttaccagtaagaaagcagtattattct
acaaataagaagtgtaaagaggagattaaaaagattcaagaactactgatggcttatgga
atcataataccagatttaaggattcttttcacccataataaggctcttgtctggcaaaaa
tcaaaggtgtctgaccataagatggcatttatgtcagttgtgggaagtgccaccatgaat
ggcatggttcctttccaataccagtctgaggccccagagatttctattaatggctatcta
cctaagccagatgctgatatcactgtaaccagcctttcaagttcagaaaaaagtttccta
tttataaaccgtcgacccgtgtatcacaaagaaataatgaagatggttcgattgtatcat
acccagagtctaaacaaagggtcccctcgctgctatccagtgttttttatgaatattgta
cttcctgcctcttgtttggatgtgaatttaactccagataaaactaagatcatgcttcaa
aataaagaatctgtcctacttgctgttgagaatgtcctgagatctgtgtaccctgattca
caaattctagaaactgataaagataaaatgcctgaagacactgtaactcataacacagat
aattctaatacacacgttgttgaaaacaaaatcacagggtgtggtgggaaatctcttagt
gtatgcccctcatttttaaacagtgttcaagaacaaaagcaatctgtgaactctttgcag
cctcaaacgtttaataaggatactattttttattctgataatgctgaagttgcctacagt
gagaatgagacctttgatggttttctggtgcctactgaatcttccaatacacaggatgaa
gccattgctgacactggattacattttgctgtcagtcacagtaattcaatggatactgag
tctttaaaccctattgattctgtgcaccaggtttcagaaaaagatacatttaaaaaaaca
acattgattaatgtccctgatatagttgatgacatttggagtaaaggaagcgcttttaaa
gactctctaggtgataacctagaacctgtaaagctactgaatttgtccacagagactcat
tttgacaaaaacactggagaagctagtaatgttcagaattcaaaggatacaaataacaaa
ctgaatgtcattagtggaaaatctggatttgtcactgcctatgacttgataagtaaaaga
gcgatcaagaaaccattgtctgcagaggaacatttcattcaggcagaacggtccaaactt
attgatgacaacccactggctagtgttgaagagatttcttcaaaagggaaagatctctgg
ggtaaactgaatcaagaagagaaattcaactatgaagaaaaagcagctaaagatttggag
aggtacaatctgcagatggctacggcaacaagagaacatgttgaaaagcaaaaagactca
gagaaaagacagaaaatgtcatctagacctagccctactcgaaaagtaacattaaaaaca
ccactttctaaccagcaaatactggacaagttattccagtctcaagaaaagaaaaaaagc
aaacctccaattagtagtgtacaagtagcctttaaattaagcatgttgaaacaacggatt
tcaaagctcacaaacccacaaaattctgtggaagaagacttttgcttgattaataagctc
agcttccctggtgcatggattgtagcatcaaaatcaaagattgctcttctgaatccctat
agggcagaagaagctttgatatttaaacgccttttaaagaaccataaaatacctgcagaa
aagttggagtctccaattgtattaacagatagcctcttaggagggtctccgtatttagat
gctctgttgagtatgcaaaaagatcccccaaagctgaatggagaaacatatttttcagat
cccagacttactgctaatgggtttttgattaaaatagtgccagggaagtcagctgttgag
aaacacattgagatagaagggatggctagcagcttgcctttttatggagtctcagatcta
aaggaaattttaagttctgtaccaattaagaaaagcaatgagctatgtgactacagacca
attaaagtgtggaattatcttgagggagaagctgtaagattgtctcgccagctaccttta
aatctttctaaagaagatgtgcaggacatcatgcacagggtaaagaatcaacttggaagt
gaaactaaagcttgtctccatggtcatcagttttttcatcatttatcagacttgccaaaa
actgaagagccatgttga
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