Xenopus laevis (African clawed frog): 379360
Help
Entry
379360 CDS
T01010
Symbol
trdmt1.L, trdmt1
Name
(RefSeq) tRNA (cytosine(38)-C(5))-methyltransferase
KO
K15336
tRNA (cytosine38-C5)-methyltransferase [EC:
2.1.1.204
]
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xla03016
]
379360 (trdmt1.L)
Enzymes [BR:
xla01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.204 tRNA (cytosine38-C5)-methyltransferase
379360 (trdmt1.L)
Transfer RNA biogenesis [BR:
xla03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
379360 (trdmt1.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
MTS
Motif
Other DBs
NCBI-GeneID:
379360
NCBI-ProteinID:
NP_001079673
Xenbase:
XB-GENE-946303
UniProt:
A0A8J0PNS4
Q7ZTJ0
LinkDB
All DBs
Position
6L:28203258..28228245
Genome browser
AA seq
396 aa
AA seq
DB search
MALRVLELYSGVGGMHCGLAESGVAAEVVAAVDVNTNANKVYKYNFPHTPLWPKTIEGIT
LKELDALSFDMILMSPPCQPFTRIGLQGDISDPRAKSFLYVLDILPRLKKLPAYILLENV
KGFESSEAREALIGTLQKCGYVYQEFLLSPTCLGIPNSRLRYFLIAKLQTEPFAFPISNT
ILEEFPSQHSIDPGRRRVIHCSENNPQAGADQKNPSCPFSGTDHGPEKTFLYKLETAQEL
ERKQGQDNDASVRMLQDFLETSVEEMSQYFLPPKSLLRYALILDIVRPTCRRSTCFTKGY
GHYVEGTGSVLQTATDVEIDSVYNSLELLNEEEKLAKLSSLKMRYFTPREIANLHGFPET
FGFPEEVTTKQRYRLLGNSLNVHIVSSLISLLLQSP
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgcgggtgctggagctgtacagcggggtcggaggaatgcactgcggcctagca
gaaagtggtgtagctgctgaagttgtggctgcagtggatgtgaataccaatgccaataaa
gtctacaaatataactttccccatactcctttatggccaaagactattgagggaataaca
ctgaaagagcttgatgctttgtcttttgatatgatccttatgagtcctccttgccagcca
ttcacaaggataggcctgcagggtgacatttctgatccaagagcaaagagcttcctttat
gttcttgacatacttccaaggctgaagaaactccctgcgtatattctgttagagaatgta
aaaggatttgaatcatctgaagccagggaagccttgattggaacattgcaaaagtgcgga
tatgtctaccaagagttcctgctgtcaccgacgtgtcttgggattcctaattctagactg
cgctactttctgattgcaaagctacaaactgaaccgtttgctttcccaatctccaataca
attcttgaagagtttccaagccagcactcaattgaccctggaagaaggagggttattcat
tgttcagaaaataacccacaagcaggtgcggatcagaaaaatccaagttgcccttttagc
ggcactgatcatggccctgaaaagacctttctttacaagctggagactgctcaagagctg
gagagaaaacaaggccaggacaatgacgcctctgttagaatgttgcaagactttctcgag
acgagtgtcgaggagatgagccagtattttctgcccccaaagtctttattgcgatatgct
ttgattctggacattgtaagacccacatgcagaagatcgacttgctttaccaaaggatat
gggcattatgttgaaggtacaggctctgttcttcagacagctactgatgttgagattgat
tctgtttataattcactggaattgctgaatgaagaggagaagcttgcaaagttgtcctca
ctaaaaatgcggtattttacccctagagagatcgcaaatcttcatggatttccagaaaca
tttggttttcccgaagaggtaacaacaaaacaacgttatcggctgcttgggaacagtctc
aatgtacatattgtctccagtctcatcagccttctgcttcagtctccctga
DBGET
integrated database retrieval system
