KEGG   Xenopus laevis (African clawed frog): 379385
Entry
379385            CDS       T01010                                 
Symbol
wdr36.S
Name
(RefSeq) WD repeat domain 36 S homeolog
  KO
K14554  U3 small nucleolar RNA-associated protein 21
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:xla00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    379385 (wdr36.S)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:xla03009]
    379385 (wdr36.S)
Ribosome biogenesis [BR:xla03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    379385 (wdr36.S)
SSDB
Motif
Pfam: Utp21 WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st WD40_CDC20-Fz WD40 WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd EIF3I WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_CAF1B_HIR1 WDR90_beta-prop_4th Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_VPS8 Beta-prop_WDR19_1st Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_HPS5 NBCH_WD40 eIF2A WD40_like Beta-prop_EIPR1 Beta-prop_IFT122_1st Zn_Ribbon_Topo Cytochrom_D1 Ge1_WD40
Other DBs
NCBI-GeneID: 379385
NCBI-ProteinID: NP_001079698
Xenbase: XB-GENE-17339491
UniProt: Q801Q6
LinkDB
Position
1S:complement(161544208..161571780)
AA seq 896 aa
MEQENVSRGSVLFTGYRSLGVYSNHIPHVVRYHKKHKEFYLVTSVGKSFLTYNVNKLGQV
AVSNALPEPINCLAADRMLVFAAHRNILKAFARNKEVVHTYKGHEAEIHLVQPFGDHVIS
VDTGNVLIIWDIKSEEEYLQLTFDKNNFAISAITHPSTYLNKILLGSQQGGLQLWNIKSN
KLLYTFQGWGSGVTVLQQAPAVDVVAIGLTCGKIIIHNIKFDETLMTFQQDWGPITSLSF
RTDGHPILAAGSPVGHIGLWDLEEKKLMSQMREAHSTAIAGLTFVHGEPLLITNAADNAI
RVWIFDGPGGQGRLLRFRMGHSAPPTFIRHHGPDGKQILSAGQDGTLHSFSTVHDRYSKS
LGHGSVDKAKSKKVGLRYLSLRLPPVTLFASEVARQSDWDGIAACHQQSLSCTTWNYVKS
TMGAHKLKPPDLQNSKTLGIHATAIEISSCGNYTVIGLSNGSVDVYNIQSAIHRGHFGKE
KAHDGPIRGVVVDGLNQITVTAGSDKLIKFWKFKTKELIQTTNLSVPPTAILLHRESAML
AVALDDFTLNIFDLETKRLVRRFQGHNGKINDMTFSPDGRWLLTASMDCTVKVWDLPSGC
LIDCFLLDSAVVSLTISPTGDFLATAHVDDLGIYLWSNKSLFSLISLRPLPADFEPTIVM
LPGGADEMEDEETVAKIDDTNEDIMEYESPEQLGEKLVTLSLLPESRWKNLLNLDIIKQR
NKPKEPPKVPKSAPFFIPTLPGLVPRFASAAQDEAPQSKIVNLGVLEQKSAFFVQLEEAL
SYQNYGIPLKTIKEMGPSSVDTELRNLAPENGGSIEVMQSFLKMIQSMFDTKKDFEVAQA
YLALFLKLHLKFISSESILLDEINGLLPSLEGTWLQLQTLFNQSLCVLNYIKSALL
NT seq 2691 nt   +upstreamnt  +downstreamnt
atggaacaagaaaatgtgtcgcggggtagcgttctatttaccggctacaggtctctgggt
gtttatagcaaccatatcccacacgtcgtgcggtatcacaaaaaacacaaggaattctac
ctagtcacctccgtggggaaaagctttttgacttacaacgtgaacaaacttggtcaggtt
gcagtgagcaatgctctcccagaaccaattaactgccttgctgcagacagaatgttggta
tttgcagcgcacaggaacattctcaaagcatttgcaagaaacaaagaggtagttcatacc
tacaaaggccatgaagctgaaattcatttagtgcagccatttggggatcacgtgatctct
gttgacaccggtaatgttctcataatctgggacatcaagtcagaagaggaatatttacag
ctaacctttgacaagaacaactttgccatttctgccataacgcatccgagcacctacctt
aataaaattttgcttgggagccaacaagggggccttcagctgtggaacatcaaatccaat
aaacttttgtatacattccaaggttggggctctggagtgacagtcctgcagcaggcacca
gcagtagacgtggttgcaattggactcacatgtggcaaaattattatacataacattaag
tttgatgaaacattaatgacgtttcagcaagactggggtccaatcacttcactatctttc
cgcacagacggtcatccaatattagcagctggtagccctgttgggcacataggattgtgg
gatctggaggaaaagaagttgatgagtcagatgcgagaagctcattcaacagctattgct
ggcctcacctttgtacatggagaaccactacttattactaatgcagctgataatgctata
cgggtgtggatatttgatggacctggagggcaaggacgtttgttgagattccggatgggt
cacagtgctccaccaacattcatcagacatcatggacctgatggaaagcagatcctcagt
gctggccaagatggaaccctgcattctttttccactgttcatgatagatacagtaagagc
cttggacatggctctgtagataaagccaaatccaagaaggttggtctccgttatttgtcc
ttaaggcttcctcctgttactctctttgcatcagaggttgcacggcaaagtgactgggat
gggattgctgcgtgtcatcagcaatctctttcttgtacaacttggaactatgttaaatct
actatgggagctcacaagctaaaacctccagacctacagaatagcaaaacacttgggatt
catgcaacagctattgaaatttcaagctgtggtaattatactgtgattggcctatcaaat
ggcagtgttgatgtatacaacattcagtctgcgattcacaggggacattttgggaaagaa
aaagcacatgatggccctataagaggagtggttgttgatggtttaaatcaaattaccgtc
acagctggcagtgacaaattaataaagttttggaagttcaagacaaaagaattaattcag
actacaaatctcagtgttccaccaactgcaatcttgctacaccgagaaagtgctatgcta
gcagtggctctggatgatttcaccttaaatatatttgatcttgaaacaaaacgactcgtg
agaagattccaggggcacaatggaaaaataaacgacatgacttttagccctgatggtcgg
tggctgttaactgcatccatggattgtacagttaaagtctgggatcttccatctggatgc
ctcattgattgctttttgttggattcggcagttgtgagtctcactatatcccctacaggg
gactttttggccacggctcatgtggatgatcttggcatttacttgtggtccaataagtcg
ttgttctctttgatctcattacgcccacttcctgcagactttgagcctaccattgtcatg
cttcctggtggtgctgatgaaatggaagatgaagaaacagtggcgaagattgatgacaca
aatgaagacattatggagtatgagtctccagaacaactgggagagaagctggtgacattg
tccttactgccagagtctagatggaagaatctcttaaaccttgacatcattaagcaaaga
aacaaacctaaagagcctccgaaagtgcctaaatctgctcccttttttattccaactttg
cctggacttgtaccacgctttgcatcagccgcacaagacgaagcaccacagtccaaaatc
gtaaaccttggggttctcgaacagaagtctgctttctttgttcagctagaagaagccctg
agttaccaaaactatggcattccgttaaaaacaataaaggaaatgggaccatccagtgtt
gacactgagctacgaaacctggctcctgagaatggaggttcaatagaggtgatgcaaagt
ttcctaaaaatgatccaaagcatgtttgataccaagaaggattttgaggtggcccaggct
tatcttgctttgttcctgaagctacatctaaagtttatatcatccgaatcgatccttttg
gatgaaatcaacgggttattaccgagtcttgaaggaacttggcttcaactgcagacttta
tttaaccagagtttgtgtgtcttaaattacatcaaaagtgcgttgttatga

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