Xenopus laevis (African clawed frog): 379385
Help
Entry
379385 CDS
T01010
Symbol
wdr36.S
Name
(RefSeq) WD repeat domain 36 S homeolog
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
379385 (wdr36.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xla03009
]
379385 (wdr36.S)
Ribosome biogenesis [BR:
xla03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
379385 (wdr36.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp21
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
WDR90_beta-prop_4th
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_VPS8
Beta-prop_WDR19_1st
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_HPS5
NBCH_WD40
eIF2A
WD40_like
Beta-prop_EIPR1
Beta-prop_IFT122_1st
Zn_Ribbon_Topo
Cytochrom_D1
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
379385
NCBI-ProteinID:
NP_001079698
Xenbase:
XB-GENE-17339491
UniProt:
Q801Q6
LinkDB
All DBs
Position
1S:complement(161544208..161571780)
Genome browser
AA seq
896 aa
AA seq
DB search
MEQENVSRGSVLFTGYRSLGVYSNHIPHVVRYHKKHKEFYLVTSVGKSFLTYNVNKLGQV
AVSNALPEPINCLAADRMLVFAAHRNILKAFARNKEVVHTYKGHEAEIHLVQPFGDHVIS
VDTGNVLIIWDIKSEEEYLQLTFDKNNFAISAITHPSTYLNKILLGSQQGGLQLWNIKSN
KLLYTFQGWGSGVTVLQQAPAVDVVAIGLTCGKIIIHNIKFDETLMTFQQDWGPITSLSF
RTDGHPILAAGSPVGHIGLWDLEEKKLMSQMREAHSTAIAGLTFVHGEPLLITNAADNAI
RVWIFDGPGGQGRLLRFRMGHSAPPTFIRHHGPDGKQILSAGQDGTLHSFSTVHDRYSKS
LGHGSVDKAKSKKVGLRYLSLRLPPVTLFASEVARQSDWDGIAACHQQSLSCTTWNYVKS
TMGAHKLKPPDLQNSKTLGIHATAIEISSCGNYTVIGLSNGSVDVYNIQSAIHRGHFGKE
KAHDGPIRGVVVDGLNQITVTAGSDKLIKFWKFKTKELIQTTNLSVPPTAILLHRESAML
AVALDDFTLNIFDLETKRLVRRFQGHNGKINDMTFSPDGRWLLTASMDCTVKVWDLPSGC
LIDCFLLDSAVVSLTISPTGDFLATAHVDDLGIYLWSNKSLFSLISLRPLPADFEPTIVM
LPGGADEMEDEETVAKIDDTNEDIMEYESPEQLGEKLVTLSLLPESRWKNLLNLDIIKQR
NKPKEPPKVPKSAPFFIPTLPGLVPRFASAAQDEAPQSKIVNLGVLEQKSAFFVQLEEAL
SYQNYGIPLKTIKEMGPSSVDTELRNLAPENGGSIEVMQSFLKMIQSMFDTKKDFEVAQA
YLALFLKLHLKFISSESILLDEINGLLPSLEGTWLQLQTLFNQSLCVLNYIKSALL
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atggaacaagaaaatgtgtcgcggggtagcgttctatttaccggctacaggtctctgggt
gtttatagcaaccatatcccacacgtcgtgcggtatcacaaaaaacacaaggaattctac
ctagtcacctccgtggggaaaagctttttgacttacaacgtgaacaaacttggtcaggtt
gcagtgagcaatgctctcccagaaccaattaactgccttgctgcagacagaatgttggta
tttgcagcgcacaggaacattctcaaagcatttgcaagaaacaaagaggtagttcatacc
tacaaaggccatgaagctgaaattcatttagtgcagccatttggggatcacgtgatctct
gttgacaccggtaatgttctcataatctgggacatcaagtcagaagaggaatatttacag
ctaacctttgacaagaacaactttgccatttctgccataacgcatccgagcacctacctt
aataaaattttgcttgggagccaacaagggggccttcagctgtggaacatcaaatccaat
aaacttttgtatacattccaaggttggggctctggagtgacagtcctgcagcaggcacca
gcagtagacgtggttgcaattggactcacatgtggcaaaattattatacataacattaag
tttgatgaaacattaatgacgtttcagcaagactggggtccaatcacttcactatctttc
cgcacagacggtcatccaatattagcagctggtagccctgttgggcacataggattgtgg
gatctggaggaaaagaagttgatgagtcagatgcgagaagctcattcaacagctattgct
ggcctcacctttgtacatggagaaccactacttattactaatgcagctgataatgctata
cgggtgtggatatttgatggacctggagggcaaggacgtttgttgagattccggatgggt
cacagtgctccaccaacattcatcagacatcatggacctgatggaaagcagatcctcagt
gctggccaagatggaaccctgcattctttttccactgttcatgatagatacagtaagagc
cttggacatggctctgtagataaagccaaatccaagaaggttggtctccgttatttgtcc
ttaaggcttcctcctgttactctctttgcatcagaggttgcacggcaaagtgactgggat
gggattgctgcgtgtcatcagcaatctctttcttgtacaacttggaactatgttaaatct
actatgggagctcacaagctaaaacctccagacctacagaatagcaaaacacttgggatt
catgcaacagctattgaaatttcaagctgtggtaattatactgtgattggcctatcaaat
ggcagtgttgatgtatacaacattcagtctgcgattcacaggggacattttgggaaagaa
aaagcacatgatggccctataagaggagtggttgttgatggtttaaatcaaattaccgtc
acagctggcagtgacaaattaataaagttttggaagttcaagacaaaagaattaattcag
actacaaatctcagtgttccaccaactgcaatcttgctacaccgagaaagtgctatgcta
gcagtggctctggatgatttcaccttaaatatatttgatcttgaaacaaaacgactcgtg
agaagattccaggggcacaatggaaaaataaacgacatgacttttagccctgatggtcgg
tggctgttaactgcatccatggattgtacagttaaagtctgggatcttccatctggatgc
ctcattgattgctttttgttggattcggcagttgtgagtctcactatatcccctacaggg
gactttttggccacggctcatgtggatgatcttggcatttacttgtggtccaataagtcg
ttgttctctttgatctcattacgcccacttcctgcagactttgagcctaccattgtcatg
cttcctggtggtgctgatgaaatggaagatgaagaaacagtggcgaagattgatgacaca
aatgaagacattatggagtatgagtctccagaacaactgggagagaagctggtgacattg
tccttactgccagagtctagatggaagaatctcttaaaccttgacatcattaagcaaaga
aacaaacctaaagagcctccgaaagtgcctaaatctgctcccttttttattccaactttg
cctggacttgtaccacgctttgcatcagccgcacaagacgaagcaccacagtccaaaatc
gtaaaccttggggttctcgaacagaagtctgctttctttgttcagctagaagaagccctg
agttaccaaaactatggcattccgttaaaaacaataaaggaaatgggaccatccagtgtt
gacactgagctacgaaacctggctcctgagaatggaggttcaatagaggtgatgcaaagt
ttcctaaaaatgatccaaagcatgtttgataccaagaaggattttgaggtggcccaggct
tatcttgctttgttcctgaagctacatctaaagtttatatcatccgaatcgatccttttg
gatgaaatcaacgggttattaccgagtcttgaaggaacttggcttcaactgcagacttta
tttaaccagagtttgtgtgtcttaaattacatcaaaagtgcgttgttatga
DBGET
integrated database retrieval system