KEGG   Xenopus laevis (African clawed frog): 379445
Entry
379445            CDS       T01010                                 
Symbol
tpm2.S, AMCD1, beta-TMad, beta-TMemb, DA1, DA2B, nem4, TMSB, tpm2, tpm2-a, tpm2-b, tpm2b
Name
(RefSeq) tropomyosin 2 b isoform 1
  KO
K10374  tropomyosin 2
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla04260  Cardiac muscle contraction
xla04261  Adrenergic signaling in cardiomyocytes
xla04814  Motor proteins
xla04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:xla00001]
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    379445 (tpm2.S)
   04820 Cytoskeleton in muscle cells
    379445 (tpm2.S)
 09150 Organismal Systems
  09153 Circulatory system
   04260 Cardiac muscle contraction
    379445 (tpm2.S)
   04261 Adrenergic signaling in cardiomyocytes
    379445 (tpm2.S)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:xla04812]
    379445 (tpm2.S)
Cytoskeleton proteins [BR:xla04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Tropomyosins
     379445 (tpm2.S)
SSDB
Motif
Pfam: Tropomyosin Laminin_II CLZ CENP-F_leu_zip ATG16 DUF16 ERM_helical TMF_DNA_bd MscS_porin DUF745 DUF1664 XhlA PUMA_CC Lebercilin Laminin_I Exonuc_VII_L DUF3450 Crescentin OVT1 Golgin_A5 CCDC22_CC Fib_alpha SlyX DUF7518 DUF7310 AAA_13 Fez1 Spectrin BLOC1_2 DUF4200
Other DBs
NCBI-GeneID: 379445
NCBI-ProteinID: NP_001079755
Xenbase: XB-GENE-6255811
UniProt: Q7SZ31 A0A8J0PPC9
LinkDB
Position
1S:202242574..202255424
AA seq 284 aa
MDAIKKKMQMLKLDKENAIDRAEQAEADKKQAEDRWKQIEEEVLAMQKKTKGTEDEVEKY
SESVKDAQEKLEMAEKKATDAEAEVASLNRRIQLVEEELDRAQERLATALQKLEETEKAV
DESERGMKVIENRATKDGEKMVDQDQQLKEAKTIAEDSDRKYEEVARKLVGIEGDLERSE
ERAEVAESKCGDLEEELKNVTNNLKSLEAQADKYSSKEDKYEEEVNQLTEKLKEAESRVE
FAEKSVVKLEKTIDDLEDEVYSQKMRYKAISEDLDNALNDITSL
NT seq 855 nt   +upstreamnt  +downstreamnt
atggacgcgattaagaagaagatgcagatgctgaagttggacaaggagaatgcgattgat
cgcgcggaacaggccgaggcggataagaaacaggcggaggatcgctggaagcagatagag
gaggaggtgttggctatgcagaagaagaccaaggggacggaggatgaggtggagaaatat
tcggagtcagtgaaagatgctcaggagaagctggagatggcggagaagaaggcgactgac
gctgaggctgaagtagcatctttgaacaggcgcatccagctggtagaggaagagttggac
cgtgctcaggaacgtcttgccaccgctctgcagaaactggaagaaacagagaaagcagtg
gatgagagcgagagaggcatgaaggtcattgagaacagggccaccaaggatggggagaag
atggtggaccaagatcagcagctgaaagaagctaaaaccatagcagaggattcagaccgc
aagtatgaggaggtggcccgtaagcttgtcggcattgagggggacctggagcgttctgaa
gagcgagctgaggtggctgagagtaaatgtggggatctggaggaagagctgaagaacgtc
accaataacttgaaatcccttgaggcacaagcagacaagtattcatcaaaggaagacaaa
tatgaggaggaggtcaatcagctgactgagaagctaaaagaagctgagagtcgggttgag
tttgctgagaaatctgtggttaaactagagaagaccattgatgatctggaagatgaggtc
tattctcagaagatgagatataaagccatcagtgaggatttggacaatgctctcaatgac
atcacctctctttaa

DBGET integrated database retrieval system