Xenopus laevis (African clawed frog): 379484
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Entry
379484 CDS
T01010
Symbol
cirbp.S, cirbp, cirbp-a, cirbp-b, cirbp2, cirp, cirp1, cirp2, Xcirp, xcirp2
Name
(RefSeq) cold-inducible RNA-binding protein B
KO
K13195
cold-inducible RNA-binding protein
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xla03041
]
379484 (cirbp.S)
Spliceosome [BR:
xla03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
379484 (cirbp.S)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
RRM_3
RBD_DEAH11
RRM_5
CofB_pilin_dom
Motif
Other DBs
NCBI-GeneID:
379484
NCBI-ProteinID:
NP_001079794
Xenbase:
XB-GENE-492785
UniProt:
Q9DED4
A0A974DU52
LinkDB
All DBs
Position
1S:complement(90454212..90459771)
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AA seq
166 aa
AA seq
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MSDEGKLFIGGLNFDTNEESLEQVFSKYGQISEVVVVKDRETKRSRGFGFVTFENPDDAK
DAMMAMNGKAVDGRQIRVDQAGKSSGDRRGGYRGGSSGGRGFFRGGRGRGGGDRGYGSSR
FDNRSGGYGGSSGSRDYYSSGRSQGSYGDRAGGSYRDSYDSYATHE
NT seq
501 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatgaaggaaaactctttatcggtggtctgaattttgacaccaatgaggaaagc
ttggagcaagtgtttagcaaatatgggcagatctctgaagttgttgtggtgaaggatcgg
gaaacaaagagatcaagaggatttggctttgtcacatttgagaatcctgatgatgccaag
gatgctatgatggcaatgaatgggaaggctgtagatggccgtcaaatccgcgttgatcag
gctggcaagtcttctggtgatagaagaggtggttacagaggtggctcttctggaggcaga
ggcttcttccgtggaggcagaggccgaggtggtggagacagaggatatggaagcagccgt
tttgataacagaagtggaggttatggcggtagcagtggatccagggactattatagcagt
ggcaggagtcaaggcagctatggtgatcgtgctggaggttcctacagagatagctacgac
agttatgctacacacgagtaa
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