Xenopus laevis (African clawed frog): 379612
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Entry
379612 CDS
T01010
Symbol
trim72.L, Mg53, trim72
Name
(RefSeq) tripartite motif-containing protein 72
KO
K12036
tripartite motif-containing protein 72
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
379612 (trim72.L)
04121 Ubiquitin system [BR:
xla04121
]
379612 (trim72.L)
Membrane trafficking [BR:
xla04131
]
Exocytosis
Others
Others
379612 (trim72.L)
Ubiquitin system [BR:
xla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
379612 (trim72.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-B_box
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
zf-RING_6
zf-C3HC4_2
RING_XB3-XBAT31
zf-RING_5
zf-C3HC4_3
zf-RING_10
zf-RING_2
zf-Nse
ECM11
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
379612
NCBI-ProteinID:
NP_001079922
Xenbase:
XB-GENE-5896500
UniProt:
Q6PGR9
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Position
9_10L:133107850..133114873
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AA seq
477 aa
AA seq
DB search
MSTPQLMQGMQKDLTCQLCLELFRAPVTPECGHTFCQGCLTGVPKNQDQNGSTPCPTCQS
PSRPETLQINRQLEHLVQSFKQVPQGHCLEHMDPLSVYCEQDKELICGVCASLGKHKGHN
IITASEAFAKLKRQLPQQQVILQEARLKKEKTVAVLDRQVAEVQDTVSRFKGNVKHQLNA
MRSYLNIMEASLGKEADKAESAATEALLVERKTMGHYLDQLRQMEGVLKDVEGQEQTEFL
RKYCVVAARLNKILSESPPPGRLDIQLPIISDEFKFQVWRKMFRALMPALENMTFDPDTA
QQYLVVSSEGKSVECADQKQSVSDEPNRFDKSNCLVSKQSFTEGEHYWEVIVEDKPRWAL
GIISETANRKGKLHATPSNGFWIIGCKEGKVYEAHTEQKEPRVLRVEGRPEKIGVYLSFS
DGVVSFFDSSDEDNLKLLYTFNERFSGRLHPFFDVCWHDKGKNSQPLKIFYPPAEQL
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactccgcaactgatgcaaggaatgcagaaggacctcacgtgtcagctgtgtctt
gagctgttccgagcccctgtcacacctgagtgtggtcacaccttctgccagggctgcttg
actggagttccgaagaaccaagaccaaaatggatcaacaccatgtccaacttgccagagc
ccctctcgcccagagacccttcagatcaaccgtcaactggaacaccttgtccaaagcttt
aagcaggtcccacaaggccactgtctggagcacatggaccccctgagtgtctactgtgag
caagacaaggagcttatctgcggggtgtgcgcctcactcggcaagcacaagggccacaat
attatcacagcttctgaggcctttgccaagctgaagaggcagcttccccagcaacaagtt
atcttgcaggaggcacgactaaagaaagagaagacggtggctgtgttagacagacaggtg
gctgaagtacaggacacagtgtctcgctttaagggcaatgtgaagcatcagctcaatgcc
atgcgctcctacctgaacataatggaagcctcacttggcaaggaagctgacaaagctgaa
agtgcggccacagaagctctgcttgtagaaaggaagactatgggccattacctggatcag
ctccggcagatggaaggagttctgaaggatgtggaaggccaggagcaaactgaattcctc
aggaaatactgtgtggtggcagcaaggttgaacaagattttatctgaatcccctcctcct
ggtcgtctggacatccagcttcccatcatctcagatgagtttaaattccaagtatggagg
aaaatgtttagagccctgatgccagcactggagaacatgacatttgacccagacacagcc
cagcagtacttggtggtttcctcagaaggcaaatctgtagagtgcgcggaccaaaagcaa
tcggtgtccgatgaacccaaccgcttcgacaaaagcaactgcctagtgagcaaacagagc
ttcacagaaggggagcactactgggaggtcatagtagaggacaagccacgttgggcattg
ggtatcatctctgagactgccaaccgtaagggcaagcttcacgccactccttccaatggc
ttctggatcattggctgtaaggaggggaaagtatatgaggcccatacagaacagaaggag
ccacgtgtcctgcgtgtagaaggccgcccagaaaagataggagtctatctcagcttctca
gatggggtggtgtccttctttgattcaagcgatgaagacaacctcaagctcctctacacc
ttcaatgagcgtttctccggtcgactccatcccttctttgatgtctgctggcatgataaa
ggaaagaactcacagcccctgaagatcttctaccccccagctgaacagctataa
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