Xenopus laevis (African clawed frog): 379679
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Entry
379679 CDS
T01010
Symbol
sall1.L, sal-1, sal1, sall1, sall1-a, sall1-b, sall1.S, sall1b, tbs, znf794
Name
(RefSeq) spalt-like transcription factor 1 L homeolog
KO
K19871
sal-like protein
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
379679 (sall1.L)
03036 Chromosome and associated proteins [BR:
xla03036
]
379679 (sall1.L)
Transcription factors [BR:
xla03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
379679 (sall1.L)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
379679 (sall1.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-C2H2_jaz
zf-met
zf-C2H2_6
zf-C2H2_15
IZUMO
zf-C2H2_11
zf-H2C2_5
zf-C2HC_2
Motif
Other DBs
NCBI-GeneID:
379679
NCBI-ProteinID:
NP_001079988
Xenbase:
XB-GENE-866060
UniProt:
Q6PCL1
LinkDB
All DBs
Position
4L:43185077..43204151
Genome browser
AA seq
1149 aa
AA seq
DB search
MKSEPEEIKLKFNHERRTERGQIHRTPKNKEAHVCSRCCAEFFELSDLLQHKKNCTKNQL
VLIVNENPPPPAEASSPSLPSDNPDEHMNDTVNNSDQADCSDLSEHGEHGKPDKEESMEV
EISETNNSSSGSNKVDNGDSSSNNPTLGTSAITTSLPQVRDLTALGNFSMINSNVIIENL
QSTRVAVAQFSQEAKTKGAANNKLAVPALMEQLLALQQQQIHQLHLIEQIRHQILLLASQ
SAEMPTSSSGPQGALRVSATPLTTLSSHLSQQLAAAAGLAQSLASQSANISGMKQLPPIQ
LPQSNPVNTVPSISSSSPNINSLAATVTPPSSERVPSSSGGSQVSNTPVPVTSSPAFAIS
SLLSPAPNPLLPQPAPNTTAFPSSLPSIGTTAEDLNSLRKSKPPSVTAFETKSTSDEAFF
KHKCRFCAKVFGSDSALQIHLRSHTGERPFKCNICGNRFSTKGNLKVHFQRHKEKYPHIQ
MNPYPVPEHLDNIPTGTGIPYGMSIPPEKPVTNWLDTKPVLPTLTTSVGMPLPPTIPTLS
PFIKTEEPQALSISHPTASPPDSVKSETASESLLKKTSHFSDEAEAAMPPILDKEEHQSQ
NSDSQQNLNTSACSPTTDSGISTMFPNPLLPLMSEQFKAKFPFGGLLDAAPASETSKLQQ
LVENIDKKSSDPNECVICHRVLSCQSALKMHYRTHTGERPFKCKVCGRAFTTKGNLKTHY
SVHRAMPPLRVQHSCPICQKKFTNAVVLQQHIRMHMGGQIPNTPVAENYPDSMGSDTGSF
DEKTIDDLDNFSDENMEDCPDSSIPDTPKSIDASQDSLSSSPLPLEVSSITALENQMKLI
NAGLAEQLQASLKSAENGSVEGDGMTNDSSSLGCDMESQSAGSPAASESTYSMHALSPFN
STIDYLKSPNTDEKLQRAVSLDPTNGLSPTPANGGALDLTSSNTDKVIKEEPLGVLFPFR
DRCKYKNTICDICGKTFACQSALDIHYRSHTKERPFICTVCNRGFSTKGNLKQHMLTHQM
RDLPSQLFEPSSSMTPNPTIPSAPSNPLATIIKTEFNGFMHGSSQDIKEQPTTNIVSSGS
LPSSATSPVLLPALARRTPKQHYCHACGKSFSSSSALQIHERTHTGEKPFACTICGRAFT
TKGNLKVRT
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atgaaatctgaaccagaagaaataaaactaaagtttaatcatgaaagaagaacagagagg
ggtcaaatccatcggacgcccaagaacaaggaggcgcatgtctgtagcagatgttgtgca
gagttctttgaactatcagatttgttgcaacacaagaagaactgcactaaaaatcaattg
gttctaattgtgaatgaaaatccaccacctcctgctgaagccagctctcctagtctcccc
tcagataatcctgatgagcacatgaatgacacagttaataactcagatcaagcagactgc
agtgacctttcagagcatggtgagcacggcaagcctgacaaagaagaatccatggaggtg
gagatttcggaaactaacaatagcagcagtggttctaacaaagtggacaatggtgattca
agcagtaataatcccacattgggtacctcagctatcacaacttcgctacctcaagtaagg
gatctgacagctttgggcaacttctctatgattaacagcaatgtcataattgagaacctt
cagagcactagagtggcagtggcacaattctcccaagaagccaaaactaagggggcagca
aacaacaagttggcagtgcctgcactcatggagcagctcttggctttacagcagcaacag
attcaccagttgcatctgattgaacaaatccgtcaccaaatattactgttggcatcacag
agtgcagagatgcccacttcatctagtggccctcaaggggctttaagggtatctgccact
ccactgactactctgagttcccatttgtcccagcagctagctgcagcagctggcttagca
caaagtcttgctagccaatcagctaacatcagtggtatgaagcaactaccccccatacag
ctacctcagagcaacccagttaacacagttccatccatcagtagttcctctccaaatata
aattcattggcagcaacagttactccaccctcctcagagagagtaccttcaagctctggt
ggctcacaggtcagtaacacacccgttcctgtaacatcatcaccagcttttgcaataagt
agtttattaagccctgcacccaatccactactacctcaacctgcccctaataccacagct
ttccctagctcattgcccagcataggaacaacagcagaggatttaaactccctgaggaaa
agtaagccacccagtgtgactgcttttgaaactaagagtacatctgatgaggcattcttc
aaacacaagtgtagattctgtgctaaggtttttggcagtgacagtgccttgcagatccat
ctacgttctcacactggcgagagaccatttaaatgcaacatatgtggaaatcggttttcc
accaaagggaatcttaaagtccattttcagcgtcataaagaaaaatatccccatattcag
atgaatccatatccagtaccagaacatttagacaatatccctacaggcactggtatacca
tatgggatgtccatcccaccagaaaagcctgtaactaactggctggacactaaaccagtt
ttacctaccttaacaacatcagtgggtatgcctctcccaccaacaattcccaccttgtct
ccatttataaaaactgaagagccacaggctttatctattagtcatcccactgccagccca
cctgactcagtaaaaagtgagacagcttcagagtcacttttaaaaaaaactagtcatttt
tcagatgaggctgaggctgccatgccacccattttagacaaagaggaacaccagtctcaa
aattcagactctcaacaaaatcttaatacttctgcctgctctcctacaactgactctggc
atctcaaccatgttcccaaatccacttttgcctctaatgtctgagcaatttaaagcaaaa
tttccattcgggggacttttggatgcagcacctgcatcagagacttcaaaacttcaacag
cttgtagagaatattgacaaaaagtcaagtgatccaaatgagtgtgttatttgtcacaga
gtgctaagttgccagagtgctctaaaaatgcattataggacacatactggagaacgacca
tttaaatgcaaagtttgtggtcgtgcttttacaactaaaggtaatttaaagactcattac
agtgtccatcgtgccatgccacctcttagagtgcagcattcatgcccaatttgtcaaaag
aaatttacaaatgctgttgtacttcaacagcatattaggatgcatatgggagggcagatt
cctaatactcctgttgctgaaaactaccctgactccatgggatcagatactgggtccttt
gatgagaaaactattgatgatctagacaatttctcagatgaaaacatggaagattgtcca
gacagcagtatcccagacacccctaaatctattgatgcatctcaagacagtctatcttct
tcaccactaccacttgaagtttcaagtattactgctttagaaaatcaaatgaaattgatc
aatgctggacttgctgaacagctccaagccagtctaaagtcagctgaaaatgggtctgtt
gagggtgatggtatgaccaatgactcctcatctcttggttgtgacatggaaagccagagt
gctggaagccctgctgcctctgaatctacttactccatgcatgctttgtctcctttcaat
agcacaattgactatctgaaatcacccaacacagatgagaagcttcagcgagctgtatct
cttgacccaaccaatggactgtcccctacacctgctaatggaggggctttggacttgaca
tctagtaacacagataaagtgatcaaagaagaacctttaggtgtgctattccctttcaga
gatcggtgtaaatataaaaacactatatgtgatatttgtggcaaaacctttgcatgtcag
agtgccttggacattcattatagaagccataccaaagaaagaccatttatttgcacagtc
tgcaatcgtggcttttcaacaaagggcaatttgaaacagcatatgctcactcaccagatg
agggatctaccatcacaactctttgaacccagttccagtatgacaccaaacccaacaatt
ccctcagcaccttctaaccctctggcaactataataaagactgagtttaatggtttcatg
catggctcttctcaggacattaaagaacagcctacaacaaacatagtttcatcaggatct
ctgccatcttctgccacgtcaccagttctgcttcctgctttggccagaaggactcctaag
cagcattactgccatgcatgtgggaaatcattctcttcttccagtgctttacaaatccac
gagcggactcacactggtgaaaaaccatttgcctgcactatatgtggaagggcattcact
acaaaaggcaaccttaaggtaagaacctga
DBGET
integrated database retrieval system
