Xenopus laevis (African clawed frog): 379683
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Entry
379683 CDS
T01010
Symbol
rbm12.L, rbm12, SWAN
Name
(RefSeq) RNA binding motif protein 12 L homeolog
KO
K24526
RNA-binding protein 12
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xla03041
]
379683 (rbm12.L)
Spliceosome [BR:
xla03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
379683 (rbm12.L)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
379683
NCBI-ProteinID:
NP_001079993
Xenbase:
XB-GENE-491737
UniProt:
Q6PCK5
A0A974BXU7
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Position
9_10L:43981631..43994919
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AA seq
877 aa
AA seq
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MAVVIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHIVGGELGEAFIVFATDEDARLGMMRT
GGTIKGSKVSLLLSSKTEMQNMIELSRRRFETANADLPPANPSRAVLTPTPGMGSTTVLS
RVNLPTTVPSFSSPSTSAVSTVTSAIESSKNITTFSTSNIGSAPQTLSTPYGNQTYASTV
PSTPSPLTAVPPPPMPTIPALPPLPAIPSIPPMPVPPPVPTLPPVPPVPPIPPVPPVPSM
APLPPMSGIPPINPPPVGPVPAGMNGSGSSMSNNINPLFLGPVHTMSLSSPNAMKPPPLN
HDDPYVCLHGLPLPVSEADIKELFHGLRIDGIVILTDPMGRHNGSALVKLITPHDTFEAL
KRNRMLMGQRFIEVSPATERQWIVNGGHMLKQQNVGHHGPPPLMQQLITRSKSPNPQSRP
RSRSPHEHGFCVYLKGLPYEAENKHVIDFFKKLNIVEDSIYIAYGSNGKATGEGFLEFRN
EEDYKSALCRHKQYMGNRFVQVHPITKKAMLEKIDMIHKKMQSYNYGEHKDAPLDAEFDK
HGPRLWGHLSNLPYSIMRKDISHFFISEGFAIDENFVQLLTDNNGQCIGQALVQFRSEDD
ARKSERLHRKKLNGRDVFLHIVNAEERNDIELNPPLHGRRSSKMPVYVNPPSVETNSVSD
EFSFPGSGIKDANGPNFNFPGNFPGPNNFGLPPPVLGSTFVEPRPPPPMPANVSSAPVDP
QGFGNSPNSFGAPPSPFGSGGPPPFGSGPPNANIPPNFNPAPPNIGSGPAILNAPPGFGP
GNMAVSGPPGFVAGSAKSGPTVIRVQNMPFTVTVDEILDFFYGYQLIPGSVCLKFSDKGM
PTGEAMVAFESRDEAMAAVVDLNERPIGSRKVKLTLG
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggtcatacgcttgcaaggtttgcccattgtggcggggaccatggacattcgc
catttcttctctggattaaccattcctgatggtggtgtgcatattgtagggggtgaactg
ggtgaggcattcatcgtttttgccactgatgaagatgcacggcttggtatgatgcgtaca
ggcggtacaatcaaagggtcaaaagtgtccttattgctgagcagcaaaacggaaatgcaa
aacatgattgagcttagccgtaggcggtttgaaaccgcaaatgcagatctgccgcctgca
aaccctagcagagctgtactgacgcctacccctggaatgggcagtaccactgtgctgagc
agggtaaatttgccaacaactgtacccagttttagcagcccttcaactagcgctgtttcc
acagttacttctgcaattgaaagcagtaaaaacataactacgttttcaacatccaacatt
ggatctgctccacaaacccttagtactccttatggtaaccaaacctatgcttctacagtg
cctagtacaccctcccctttgactgcagtaccaccacctccaatgccgacaattcccgct
ttgccacccttgcctgctattccctcaattccccctatgccagttcccccaccagtacca
acactgcctccagtcccccctgttccaccaataccccctgttcctccagtgccatccatg
gctccacttccaccaatgtctggcataccacccataaacccccctcctgtaggcccagtg
cctgctggtatgaatggctcaggttcctcaatgagcaataacatcaacccactattttta
ggccctgtacatacaatgtcattaagttctccaaatgctatgaagccacctcctttaaat
catgatgatccatatgtgtgtcttcatggtctgccccttcctgtatcagaagctgatatt
aaggagcttttccacgggttacggatagatggtattgtgattctaacagatcctatgggc
cggcataatggtagtgcattggtgaaactaattacccctcatgacacatttgaagctctg
aagcgtaaccgaatgctgatgggccagcgtttcatagaagtcagtcctgctacagagaga
cagtggatagttaatggtggtcatatgttaaaacaacaaaatgttggtcatcacggacct
cctcctttgatgcagcaactaataaccagatctaaatcgcccaatccacagtctcgccct
aggtccagatccccacatgaacatggcttctgtgtgtatctgaaaggtttgccctatgag
gcagaaaataaacatgtcatagatttctttaaaaaattaaacattgttgaagacagtata
tacatagcctatggttccaatggcaaagcaacaggtgaaggttttcttgagtttaggaat
gaagaggactataaatcagccttatgccgccacaagcaatacatgggaaatcgttttgtg
caagtccatcccataacgaaaaaggcaatgctagaaaagatagacatgattcataagaaa
atgcaaagctacaattacggtgagcataaagatgcacccttggatgcagagtttgataaa
catggccctagactgtggggtcacctgtccaatttaccgtatagtattatgagaaaggat
ataagtcacttcttcatctctgaaggttttgcaattgatgagaactttgtacagctcctt
acagataacaatgggcaatgtataggacaggcactggttcagtttaggagtgaggatgat
gctcggaaatctgagcgtctgcaccgaaaaaagttgaatgggagagatgttttcttacat
atagttaatgcagaggagagaaatgatatagagcttaatccaccgttacatggtaggaga
agctccaaaatgcctgtatatgtgaaccccccatctgtggagaccaattctgttagtgat
gagttttcctttcctggtagtggcattaaggatgctaatggcccaaattttaactttcct
ggtaacttcccagggccaaataattttggactcccacctcctgttctaggaagcaccttt
gtagagcccagaccacctcctccaatgccagcaaatgtatcgagtgctccagttgatcct
caaggctttggaaacagccctaatagttttggtgcccctccatctccatttggaagtggt
ggtccccctccatttggcagtggacctccaaatgcaaatataccacctaacttcaaccca
gcccctccgaatataggaagtggaccagcaatattgaatgcacctccaggatttggccca
ggaaacatggcagttagcgggccacctggctttgtagctgggtctgcaaaatcagggcca
acggtaatcagagtgcagaatatgccatttactgttactgtagatgaaatactagacttc
ttttatggctaccaattaatccctgggtctgtatgcttgaagttcagtgataaggggatg
cccacaggggaagccatggttgcttttgagtcccgtgatgaggctatggctgctgtagtt
gatctaaatgaaagacccattggctcaagaaaagtgaaactcactttgggataa
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