Xenopus laevis (African clawed frog): 379684
Help
Entry
379684 CDS
T01010
Symbol
lrrn1.L, figler3, lrrn1, lrrn1-a, lrrn1-b, nlrr-1, nlrr-6, XlNLRR-6, xnlrr-1
Name
(RefSeq) leucine rich repeat neuronal 1 L homeolog precursor
KO
K24492
leucine-rich repeat neuronal protein 1/2/3
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xla04990
]
379684 (lrrn1.L)
Domain-containing proteins not elsewhere classified [BR:
xla04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
379684 (lrrn1.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_9
ig
LRR_1
V-set
Ig_2
fn3
LRR_EndoS
Pur_ac_phosph_N
LRRNT
LRR_RPS2
CBM_35
LRR_NXF1-5
LRR_LRWD1
LRRCT
Fn3_ELFN
Motif
Other DBs
NCBI-GeneID:
379684
NCBI-ProteinID:
NP_001079994
Xenbase:
XB-GENE-866210
UniProt:
Q6PCK4
A0A974D6X6
LinkDB
All DBs
Position
4L:129133401..129145894
Genome browser
AA seq
718 aa
AA seq
DB search
MARISVLVLTACQLLLGLLTSSLTDSSAPANECPQLCVCEIRPWFTPQSTYREATTVDCN
DLRLTKIPANLSLDTQVLLLQSNNIGKTNGELQRLVNLTELDLSQNNFTSIHDVGLSNLS
QLTTLHLEENQIFEMTDYCLQDLTNLQELYINHNQLNSISPSAFSGLRNLLRLHLNSNKL
RIIDSRWFESTPNLEILMIGENPVIGILDLNFQPLVNLRSLVLAGMYLSDIPGNALLGLD
NLESLSFYDNKLGKVPQLALQKVPNLKFLDLNKNPIRKIQEGDFKNMLKLKELGINNMAE
LVSVDRNAMENLPELTKLEATNNPKLSYIHRSAFRNVPTLESLMLNNNALNSVYRGTVES
LPNLREISIHSNPLRCDCVLHWMGSNQTSIRFMEPLSMFCALPPEYRGQPVKEALAQDPA
GEQCLPMISQDTFPSHLSLDIGMTISLDCRATAEPEPEIYWVTPLGHKVTLETLSDKYHL
SGEGSLQIFNVQVEDSGRYTCVAQNSEGADTKVATLRVNGTLLDGTQALRLYVQQAESSS
VLVSWKVSSSVLASNLKWSSATMKIDNPHITYTARVPADVHEYNLTHLQPATEYEVCLTV
SGLHQQAQRACINVTTKGTSYSLTVTDQETSAALAAVMGSLFALISFASVSVYAAKRFQR
KNYRHSLKKYMQKTSSIPLNELYPPLISLWEGDSEKEKEGTAESKASQVDTSRSYYMW
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggctcggataagtgtcctcgtcttgactgcctgtcagctgttgcttggacttcttacc
agctcattaactgactcctcagctccagctaatgagtgcccccagctttgtgtttgtgag
atccgtccatggtttacgcctcagtctacataccgtgaagccacaacagtggattgcaat
gacctacgtttgacaaagatcccggcaaatctctctttggatacacaggtgcttctctta
caaagcaataacattggtaagaccaacggagaactgcaaagactggtcaatctgacagaa
ctggacttgtcccagaataacttcacctccatccatgacgtgggcttgtctaatcttagc
cagcttactactttgcatttggaggagaatcagatttttgagatgactgattattgtcta
caggacttgactaacctgcaggaactctacattaatcacaaccagcttaattccatctct
cctagtgccttctctgggctgcgtaatctactcaggctgcacctaaactctaataagcta
cgtataatcgacagccgctggtttgaatcaacccccaaccttgaaattttgatgattgga
gagaatccagtaattgggatcctagacttaaacttccaaccacttgttaacttaagaagc
ttggtgctcgcgggaatgtacctaagtgacatcccaggaaatgcattgctgggtttggat
aacctggagagtctttcattctatgataacaaacttggcaaagttccccagcttgctctg
cagaaagtacccaatctaaaattcttggacctcaataagaaccctattcgcaagatccag
gaaggtgactttaagaacatgctgaaattaaaagaacttggtatcaataatatggcagag
ttggtgtctgtagatcgcaatgcgatggaaaatctccctgaactgaccaaattggaagct
acaaataaccctaagctctcttacatccaccgatcggcttttaggaatgtgcctaccctt
gaaagcctaatgcttaataataatgcattgaactcagtgtatcgtgggactgttgaatcc
ctcccgaacctgcgtgagatcagtattcacagcaatccactgagatgtgattgtgtcctg
cattggatgggttctaaccaaaccagcatccgtttcatggagcctctgtctatgttctgt
gctttaccccctgagtaccgtgggcaacctgtaaaggaagcattggctcaagaccctgca
ggagagcagtgtctgcccatgatctcccaagatacatttcccagtcacctcagcctggac
atagggatgaccatctcactagattgcagggcaacagcagagcctgaaccagaaatatac
tgggtaactcctttggggcataaagtgactttggaaactctttctgacaagtaccactta
agtggagagggcagtttgcagatttttaatgtgcaggtggaggattctggacgttacacg
tgtgtggcgcagaattcagaaggagcagatacaaaggtagccaccctgagagtaaatgga
accttgttagatggcacacaagctcttagactctatgttcaacaagcagaatccagttca
gtcttggtatcatggaaagttagttcaagtgttttggcttctaaccttaagtggtcttcg
gccactatgaagattgataacccccatatcacttatacagcacgtgtgccagcggatgtc
cacgagtataatctcacccatctccagccagccactgaatatgaagtgtgcctgacggtg
tcggggctacaccaacaagctcagcgtgcctgcatcaatgtcaccactaaaggcacgtcc
tactcgttgactgttactgatcaggagaccagtgctgccctggctgccgtcatgggttcc
ctattcgccctaataagttttgcctctgtttctgtttatgccgccaagaggttccagaga
aagaattatcgccactcgttgaagaagtatatgcaaaagacctcatccattccactcaac
gagctttatcctcctctcataagcctgtgggagggagacagcgaaaaagaaaaagagggg
acagcagaatcgaaagcttcccaggtggacacatcccggagctattacatgtggtaa
DBGET
integrated database retrieval system
