Xenopus laevis (African clawed frog): 379688
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Entry
379688 CDS
T01010
Symbol
sox4.L, EVI16, sox4, sox4-a, sox4-b
Name
(RefSeq) SRY-box 4 L homeolog
KO
K23581
transcription factor SOX4 (SOX group C)
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
379688 (sox4.L)
Transcription factors [BR:
xla03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
379688 (sox4.L)
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
379688
NCBI-ProteinID:
NP_001079998
Xenbase:
XB-GENE-865404
UniProt:
Q6PCK0
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Position
6L:100511919..100515776
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AA seq
387 aa
AA seq
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MVQQTNNTENTEAALLAGERSESGAGIELDMASSPTPGATASTGGKADDPSWCKTPSGHI
KRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKQLKDSDKIPFIREAERLRLKH
MADYPDYKYRPRKKVKSSGSKPGDKTCGSPGSSSSSSVSSTGSGKPPVKKSSGTKLCNKP
HSKLVLGARAFPEQQQQPCLPDHHSLYKSRAAASVRHDKKPKNRVYIFGGGAGYQGSVAV
PASPTLSSSSAEASDPLSLYEDGSGSAQNSPGSPSEHDGYTRASSPAPSTSHSSSSAASS
PSSASSSSSSSDEELEDELLELNPSPGFENMSLGSFSSAALDRDLDFNFEPGSGSHFEFP
DYCTPEVSEMISGDWLESSISNLVFTY
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggtgcaacaaaccaacaacacggagaacactgaggcagcgctgctggcaggggagagg
tcggagtcgggcgccggtatagagctggacatggcttcctctcccacacctggcgccacg
gcctctactgggggcaaagcggatgacccgagctggtgcaagacccccagtgggcacatc
aagcggccaatgaacgccttcatggtctggtctcagatcgagcggaggaaaatcatggag
cagtccccagacatgcacaacgcagagatctccaagcgcctgggcaaacgctggaaacag
ctaaaggacagcgacaagatcccgttcatcagggaggccgagcgactgaggctcaagcac
atggcagactacccggactacaagtaccgaccccggaagaaggtcaagtctagcggatcc
aagcccggggataagacatgtggcagccccgggagcagcagcagcagttctgtgagcagc
acagggtcaggcaaacccccagtgaagaagagtagcggcaccaagctttgcaacaagccg
cacagcaaactcgtcctgggcgccagagctttccccgagcagcagcagcagccgtgtctc
ccggatcatcactcgctgtacaagtcccgggctgcagcgtcagtcagacacgacaagaag
ccaaagaaccgggtgtacatattcggggggggcgcgggttaccaaggctcagtggcagtg
ccagccagtcctactctgagcagcagctcggccgaggccagtgacccgctcagcctgtac
gaggatggaagcggttcggcgcagaactcccccggttccccctccgagcacgacggctac
acgagggcgtcctcaccggccccgtccacctctcactcctcctcctcggctgcatcctcc
ccctcctctgcatcctcctcctcttcttcctcggacgaagagctggaagacgaactgctg
gagctcaacccgagcccgggcttcgagaacatgtccctgggtagtttcagctccgctgcc
ctggacagagacctggactttaacttcgagccgggctcgggctcccacttcgagttcccg
gactattgcacccccgaggtgagcgagatgatctccggagactggctggagtccagcatc
tctaacctggtatttacctactga
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