Xenopus laevis (African clawed frog): 379734
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Entry
379734 CDS
T01010
Symbol
tbl3.L, tbl3
Name
(RefSeq) transducin (beta)-like 3 L homeolog
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
379734 (tbl3.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xla03009
]
379734 (tbl3.L)
Ribosome biogenesis [BR:
xla03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
379734 (tbl3.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Utp13
WDR55
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_SCAP
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
ANAPC4_WD40
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_NWD2_C
Beta-prop_DCAF12
Beta-prop_NUP159_NUP214
Beta-prop_Vps41
WD40_like
WD_LRWD1
Beta-prop_HPS5
Beta-prop_WDR19_1st
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
379734
NCBI-ProteinID:
NP_001080042
Xenbase:
XB-GENE-1012182
UniProt:
Q6PCE6
LinkDB
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Position
9_10L:120898204..120919318
Genome browser
AA seq
831 aa
AA seq
DB search
MAAPLIKFKTNYAVTRKIEAFYKGGKVQISSDGTYILCTCGNKLNILDIATGAVAYTIEQ
DDQEDITSFALSPDDEILVTASRALLLKQWDWRQGQCSRTWKAIHTAPVSTMTFDPTSTL
LATGGCDSTIKIWDVIKQYCTHNLKGSSGVVHLVQFHPDMSRLQLFSSSMDYKIRLWDLK
SSKCLCILETHFSAVTSLCFSTDGNTMISSGRDKICTVWDLKTNSPKRTVTVYESVEAVV
LLPDSPDVIGRENASQSLLFLTAGSKGILRVWDAATAVCVYGQTLPHITEGNSTEEEANE
HSLTHCLLIPDLSQVATVTAEHNILMYDLQNLQLKKQFAGYNDEVLDVKFLGPSDSHIVV
ATNSPQLKVFDLETSNCQILYGHTETVLALDVFKKGLLFASCAKDRSIRVWRMKKASGKV
SCVAQGSGHTNGVGTISCSRMKETFLVSGSQDYTIKLWKLPESLVNKQGKGSAGDLERLQ
ACATEKAHDKDINSVTVSPNDKLIASGSQDKTAKLWSAADLSLLGVFRGHKRGIWCVQFS
SVDQVLATTSADGTLKLWGLQDFSCLKTFEGHDASVLKVSFVSRGAQLLTSGSDGLLKLW
TIKSNECVKTLDTHEDKVWGLHCNREDDALVTGSADSTIILWKDVTETELAEEQAKEEEG
ILKQQELSNLLHEKRFLKALGLAISLDQPYTVLTVIKAILQEPQGIDDLEKHIVRLRPDQ
KESILRYCCVWNTNSRNCHESQSVLNILLTHEPPESLLQFTGIRGSLEALIPYTERHMQR
MGRLLQASMFVDFMWQQMRLTDLPAEDKAPESIATKSAPVAGKHKISSVQG
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atggcggctcccttaataaagttcaagaccaactatgccgtgacaaggaaaatcgaagct
ttctacaaaggaggaaaagttcagataagcagcgatgggacgtatattctttgtacatgc
gggaataagctcaatatactggatatcgccaccggggctgtcgcttacaccatcgagcag
gatgaccaggaagatataacctcatttgcgctcagccccgatgatgagattttggtgacg
gccagtcgggcattgttgctaaagcagtgggactggaggcagggacaatgctctcgcacc
tggaaagccattcacaccgctccggtctccacaatgaccttcgaccccacttccacatta
ttggccacaggaggctgcgacagcaccataaagatctgggatgtcatcaagcagtactgt
acccacaacctgaaaggttcctcgggggtcgtccacttggtgcagtttcatcccgatatg
tcacgactgcagcttttctcatcctccatggactacaagattcgcctttgggacctgaaa
agcagcaagtgcctctgcatactggagacccacttcagcgccgtgacctctctttgcttt
tccactgatggaaacacaatgatcagctctggacgggataaaatttgcaccgtgtgggat
ctgaagaccaacagcccaaagaggaccgtgactgtgtatgagagtgtagaggctgtggtc
cttctcccagattctcctgatgtgattggtcgagaaaatgcctcccagtctctgctgttc
ctcaccgctggcagtaaaggcatactgcgagtgtgggacgctgctactgccgtctgtgtc
tatggccagactctgcctcacatcaccgagggcaactccacagaggaggaggctaatgag
cacagcctgacccactgcctgctcatccctgatctgagccaggtggccacagtcactgct
gaacacaacatcctcatgtacgatcttcagaacctccagctgaagaagcagttcgccgga
tataacgatgaggttctagatgtgaagttcctgggtccttccgactctcatattgtggtg
gccaccaacagcccccaactgaaagtgtttgatttggaaacctcaaattgccagatactc
tacgggcatacagagactgtccttgccttggatgtttttaagaaaggccttctcttcgcc
agctgtgctaaggacaggagcataagagtttggcgaatgaaaaaagcctcagggaaggtc
tcatgcgttgcacagggcagcggtcataccaacggagtgggaacaatctcatgttcaaga
atgaaagagacttttctagtaagtggcagccaagactacaccattaaactctggaagctc
ccagaatccctagttaacaaacagggcaaaggcagtgcaggagatctggagagattgcag
gcctgcgccactgagaaggcacatgataaggatataaacagcgtcactgtctcacccaat
gacaagctgatcgcttccggatctcaggacaagacagccaaactgtggtcggccgcggac
ctctctctcctgggagtctttcggggccacaagaggggcatttggtgcgtgcagttctca
agcgtcgaccaagtcctggccaccacatctgctgatgggacactgaaattgtggggattg
caggacttcagttgcctgaagacgtttgagggtcacgatgcttcagttctcaaggtgtca
tttgttagtcgtggggctcagcttctcacaagtggctccgacggcctgctgaaactctgg
accataaaatccaatgagtgtgtgaagacactggacacccacgaagacaaagtctggggt
cttcactgcaacagggaggatgatgctctggtcactggatctgctgactctaccattatc
ctatggaaggatgtcacagagacggagctggctgaagagcaggcaaaggaagaggagggc
atcctaaagcaacaagagctgtcaaatttgctgcatgagaagcgattcctgaaagcgctg
ggactggccatctcattagatcaaccttacactgtgctcaccgtcatcaaagcgatcctc
caggaaccacaaggcatcgatgacttggaaaaacacattgtgaggttgcgcccggatcag
aaagagtccatactgcgctactgctgtgtctggaacacaaactcacgcaactgccacgag
tcacagtccgtgctgaacatccttcttacccacgagcccccagagagcctcctgcagttc
actgggatccgagggtccctggaagccctcataccttacacagagaggcacatgcagcgg
atgggcaggctgctccaggcgtccatgtttgttgactttatgtggcagcaaatgcgactg
acggatttgccagcagaagacaaggcacctgagtctattgctacaaagtctgctcctgtt
gctgggaagcacaaaatctcctccgttcagggctga
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