Xenopus laevis (African clawed frog): 379748
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Entry
379748 CDS
T01010
Symbol
tuba1cl.3.L
Name
(RefSeq) tubulin alpha chain 1c like, L homeolog
KO
K07374
tubulin alpha
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04145
Phagosome
xla04210
Apoptosis
xla04530
Tight junction
xla04540
Gap junction
xla04814
Motor proteins
xla05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
379748 (tuba1cl.3.L)
09142 Cell motility
04814 Motor proteins
379748 (tuba1cl.3.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xla03019
]
379748 (tuba1cl.3.L)
03036 Chromosome and associated proteins [BR:
xla03036
]
379748 (tuba1cl.3.L)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xla04812
]
379748 (tuba1cl.3.L)
04147 Exosome [BR:
xla04147
]
379748 (tuba1cl.3.L)
Messenger RNA biogenesis [BR:
xla03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
379748 (tuba1cl.3.L)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
379748 (tuba1cl.3.L)
Cytoskeleton proteins [BR:
xla04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
379748 (tuba1cl.3.L)
Exosome [BR:
xla04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
379748 (tuba1cl.3.L)
Exosomal proteins of other body fluids (saliva and urine)
379748 (tuba1cl.3.L)
Exosomal proteins of colorectal cancer cells
379748 (tuba1cl.3.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
379748
NCBI-ProteinID:
XP_041431907
Xenbase:
XB-GENE-6254951
UniProt:
Q7ZYU9
LinkDB
All DBs
Position
9_10L:complement(62210133..62212644)
Genome browser
AA seq
452 aa
AA seq
DB search
MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQISTA
VVEPYNAILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATVKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGTDSVEGEGEGEEGEEY
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgagggaatgcatctcagtccacgtgggacaggcaggagtgcagattggcaatgcatgc
tgggagttgtactgcctggaacatgggatccaaccagacggtcagatgcccagtgacaaa
accattggtggaggagatgattccttcaacaccttcttcagtgagacaggagcagggaag
catgtcccccgtgctgtgtttgtggacctggagccaactgtgattgatgaggttcggacc
ggtacctaccgccagctcttccaccctgagcaactcatcacaggcaaggaagatgctgcc
aataactatgcccgtggtcattacaccattggaaaggagatcattgacctggtgctggac
agaatccgcaagctggctgaccagtgcacaggactccagggtttcctcatcttccacagc
ttcgggggtggtactggctctggattcacctccctgctgatggaacgtctctctgttgac
tatggcaagaagtccaagctagaattctctatctatccagcacctcaaatctccactgct
gtggtggaaccctacaacgctatcctcaccacccacacaaccctggaacattctgactgt
gccttcatggtggataatgaagccatttatgacatctgcagaaggaaccttgacattgaa
cgtccaacctacaccaacctgaaccgtctgattggccagattgtgtcctctattacagct
tccctcagatttgatggagcactaaatgtggacctgacagaattccaaaccaacttggta
ccctacccccgtatccatttcccattggccacttatgcccctgttatctctgcagagaaa
gcttatcatgagcagctctctgtagctgagatcaccaatgcttgctttgagccagccaat
cagatggtgaaatgtgacccccgtcatggtaaatacatggcctgttgtctgctgtaccgt
ggtgatgtggtgcccaaagatgtcaatgctgctattgccacagtaaaaaccaagcgcacc
atccagtttgttgactggtgcccaactggttttaaggttggtatcaactaccagccacca
actgtggttcctggtggggatctggccaaagttcagcgtgctgtgtgcatgttaagtaac
accaccgccattgctgaagcctgggctcgcctggatcacaagtttgaccttatgtatgcc
aagcgtgcctttgtgcactggtatgtaggggagggaatggaggaaggggagttctctgag
gcccgtgaagatatggctgccctggagaaggattatgaggaggttggtactgacagtgtg
gagggagagggagaaggagaagagggagaagagtattaa
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integrated database retrieval system
