Xenopus laevis (African clawed frog): 379759
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Entry
379759 CDS
T01010
Symbol
abcf2.L, abc28, abcf2, hussy-18, hussy18, m-abc1
Name
(RefSeq) ATP binding cassette subfamily F member 2 L homeolog
KO
K06185
ATP-binding cassette, subfamily F, member 2
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xla03009
]
379759 (abcf2.L)
Ribosome biogenesis [BR:
xla03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
379759 (abcf2.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
AAA_22
AAA
MMR_HSR1
RsgA_GTPase
AAA_28
AAA_15
AAA_16
VapE-like_dom
AAA_33
AAA_18
AAA_14
NACHT
AAA_30
AAA_23
Dynamin_N
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
379759
NCBI-ProteinID:
NP_001080067
Xenbase:
XB-GENE-6078163
UniProt:
Q7ZWW5
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Position
6L:175400..186221
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AA seq
607 aa
AA seq
DB search
MPSDLAKKKAAKKKEAAKARLRPKKDNEDTAPEEPEQQSTNGSSVTEVDEVTKQMEEFEL
RKAEARAVTGVLASHPNSTDVHIINMSLTFHGQELLSDTTIELNSGRRYGLIGLNGTGKS
MLLSAVGGREVPIPDHIDIYHLTREMPPSDKSALQCVMEVDTERNMLEKEAERLAHEDAE
CEKLMELYERLEELDAAKAEVRASRILHGLGFTPAMQRKKLKDFSGGWRMRVALARALFI
RPFMLLLDEPTNHLDLEACVWLEEELKSFRRILVLISHSQDFLNGVCTNIIHLHNRKLKY
YTGNYDQYVKTRLELEENQMKRFNWEQDQIAHMKNYIARFGHGSAKLARQAQSKEKTLQK
MMSSGLTERVVSDKTLSFCFPSCGKIPPPVIMVQHVSFRYSPEGPLIYKNLEFGIDLDTR
VALVGPNGAGKSTLLKLLAGELLPSDGMIRKNSHVKIGRYHQHLTEQLELELSPLEYMMK
CYPDIKEKEEMRKIIGRYGLTGKQQVSPIRNLSDGQKCRVCFAWLAWQNPHMLFLDEPTN
HLDIETIDALADAINEFEGGMMLVSHDFRLIQQVAQEIWVCEKQAVTKWSGGILSYKQHL
KSRLGDD
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgccctctgatctggccaagaagaaagcggcgaagaagaaggaggcggctaaagctcgt
ctgagacccaagaaagacaatgaggacaccgcccccgaggaaccggagcagcagtcgacc
aatggctcctctgtcactgaggtggatgaagtgacgaagcagatggaggagtttgagctg
aggaaggctgaagcccgtgctgttactggagtcctggcgtctcacccaaacagtacggac
gttcatatcattaacatgtcgctgaccttccatgggcaggagctgctgagcgacaccacc
atcgagctgaactctggcaggagatacggtctgattggtctcaatggcaccgggaagtcc
atgctgctgtcggcagtgggggggcgggaggtgccaatcccggatcacatcgatatttat
cacctgacccgggagatgccccccagtgataagagcgccctgcagtgcgtcatggaggtg
gatacggagaggaacatgctggagaaggaggcagagagactggcgcatgaggatgcggaa
tgtgagaagctgatggagttgtatgagcggctggaggagttggacgcagcaaaggcagag
gttcgggcgtcacggatcctacacggactgggattcacgcccgccatgcagcgcaaaaag
ctgaaggatttcagtgggggctggaggatgcgtgtggcccttgccagagctctattcatt
cgcccattcatgctgctcctggatgaaccaaccaatcaccttgacctggaagcctgtgtg
tggctggaggaggagctaaaatccttccggcggatcctggtgctgatctctcactcgcag
gatttcctcaatggcgtctgcaccaacatcattcacctgcacaaccgcaagctcaagtac
tacacgggtaattatgatcagtatgtgaagactcgcctggagctggaggagaatcagatg
aagaggttcaattgggagcaggaccagattgcgcacatgaagaattacattgctcggttt
gggcacggcagcgccaagttggcccgtcaggcgcaaagtaaagagaaaacgttgcagaaa
atgatgtcgtccggcctaaccgagcgagtggtctctgacaagactttgtccttctgtttc
ccgtcctgtgggaagattccgcctccggtcattatggtgcagcacgtcagcttccgctac
tcccccgaggggcctctgatctacaagaacctggagtttgggattgatcttgacacgcga
gtggccctcgtgggccctaatggagctgggaaatccactctgctcaagcttctggctggg
gagttactgccgtcagacggaatgatccggaagaattctcatgtaaagattggtcgctat
catcagcacctgacggagcagctggagctggaactgtcgcccctggaatacatgatgaag
tgttaccccgatatcaaggagaaggaggagatgaggaagatcattggaagatacgggctg
accgggaaacaacaggtcagtccaatccgtaacctgtctgatgggcagaagtgccgtgtg
tgctttgcatggcttgcctggcagaacccccacatgctcttcttggatgaacccacaaat
cacttggacattgagactattgatgccctggcagacgccatcaatgaattcgaggggggg
atgatgctcgttagccacgacttccggctcatccagcaggttgcccaggagatttgggtc
tgtgagaaacaggcagtgactaagtggtccgggggtatcctgtcctacaagcagcacctc
aaatcccggctcggagatgattaa
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