KEGG   Xenopus laevis (African clawed frog): 379792
Entry
379792            CDS       T01010                                 
Symbol
sf3b4.S, sf3b4, spx
Name
(RefSeq) splicing factor 3b subunit 4 S homeolog
  KO
K12831  splicing factor 3B subunit 4
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:xla00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    379792 (sf3b4.S)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:xla03041]
    379792 (sf3b4.S)
Spliceosome [BR:xla03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    379792 (sf3b4.S)
 Complex B
    379792 (sf3b4.S)
 Complex C
   U2 SnRNP specific factors
    379792 (sf3b4.S)
SSDB
Motif
Pfam: RRM_1 RRM_7 OB_RNB
Other DBs
NCBI-GeneID: 379792
NCBI-ProteinID: NP_001080100
Xenbase: XB-GENE-866214
UniProt: Q7ZX30 A0A974H6D3
LinkDB
Position
8S:complement(96500068..96509951)
AA seq 377 aa
MAAGPISERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVE
FLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTF
SAFGVILQTPKIMRDPDTGNSKGYAFINYASFDASDAAIEAMNGQYLCNRPITVSYAFKK
DSKGERHGSAAERLLAAQNPLSQADRPHQLFADAPPPPSVPAVITSLTSAVAAGIPTFPP
VPPPGAMPPGIPPSMPPPPMSPVTGAGQATAAPQVPLPFQSTAMHPGMQMQIPHPSIPGT
RPPGMGPPGPPPMGMPPRAPPFGAMGHPGMPPGMRPPPLMPPYNGPPRPPPYGYQRAPLP
LPRPAPPRPPMRLPMTQ
NT seq 1134 nt   +upstreamnt  +downstreamnt
atggcggctgggccgatatcagaacggaaccaggatgccacggtgtatgttggaggcctg
gatgaaaaggtgtctgagcctctgctatgggagctcttcttacaagcagggccggtagtg
aatacacatatgcccaaagacagagtcacggggcaacatcaaggttatggctttgtggag
tttctgagtgaagaggatgctgattacgccataaagattatgaacatgataaagctctat
gggaaacccataagagtaaataaagcctcggcacacaacaagaacctggatgtgggcgcc
aacatcttcattggcaacctggaccctgagattgatgaaaagttgctctacgacaccttc
agtgcttttggggtcatcctgcagacccccaagatcatgagagatccggacaccggcaac
tccaaaggctacgccttcatcaattacgccagttttgatgcctcggatgcagccatcgag
gccatgaatggacagtacttgtgcaacaggcccatcactgtttcttatgctttcaagaag
gactccaaaggagagcggcacggctccgcagcagagagattgctggccgcccagaatcca
ctttcacaggccgaccggcctcaccagcttttcgccgacgcccctccccctccatctgta
ccagctgtcattacgtcattgaccagcgcagttgctgcaggtattcccacatttcctcct
gttcctccacctggagcgatgcctcctgggattccaccctccatgcctcctccaccaatg
tctcctgtcacaggcgctgggcaagctacagccgctcctcaagtcccgcttccctttcag
tctacagctatgcacccaggtatgcagatgcagattccacacccctctatcccaggaaca
cgcccaccaggaatggggccaccaggacctcctcctatgggaatgccaccaagagctcca
ccatttggagccatgggtcacccaggcatgcctccaggtatgaggccaccacccctgatg
ccgccatacaacggccccccacgacccccgccatacggttaccaacgtgccccactaccc
ttgccccgacctgctccacctcgacctccaatgaggctccccatgacacagtga

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