KEGG   Xenopus laevis (African clawed frog): 379845
Entry
379845            CDS       T01010                                 
Symbol
arpc1a.S, arpc1a, arpc1a-a
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A-A
  KO
K05757  actin related protein 2/3 complex, subunit 1A/1B
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla04144  Endocytosis
xla04517  IgSF CAM signaling
xla04530  Tight junction
xla04810  Regulation of actin cytoskeleton
xla05100  Bacterial invasion of epithelial cells
xla05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:xla00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    379845 (arpc1a.S)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    379845 (arpc1a.S)
  09144 Cellular community - eukaryotes
   04530 Tight junction
    379845 (arpc1a.S)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    379845 (arpc1a.S)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    379845 (arpc1a.S)
   05100 Bacterial invasion of epithelial cells
    379845 (arpc1a.S)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:xla04131]
    379845 (arpc1a.S)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:xla04812]
    379845 (arpc1a.S)
Membrane trafficking [BR:xla04131]
 Others
  Actin-binding proteins
   Arp2/3 complex
    379845 (arpc1a.S)
Cytoskeleton proteins [BR:xla04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Arp2/3 complex
     379845 (arpc1a.S)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_EML_2 Beta-prop_WDR3_1st Beta-prop_WDR5 WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_RIG_2nd WD40_CDC20-Fz ANAPC4_WD40 WDR55 Beta-prop_WDR35_TULP_N Beta-prop_Aladin Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR19_1st Beta-prop_WDR75_1st Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_IFT140_1st EIF3I Rax2 Beta-prop_EIPR1 Beta-prop_SPT8
Other DBs
NCBI-GeneID: 379845
NCBI-ProteinID: NP_001080153
Xenbase: XB-GENE-6254683
UniProt: Q8AVT9
LinkDB
Position
9_10S:complement(83312665..83331968)
AA seq 370 aa
MSLHQFLLEPISCHAWNKDLTQIAISPNNHEVHIYKKSGDQWVKGHELKEHNGHITGIDW
APKSDRIVTCGADRNAYVWSQKDGVWKPTLVILRINRAATFVKWSPLENKFAVGSGARLI
SVCYFESENDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKTRVFSAYIKEVDEKP
ASTPWGSKMPFGQMMAEFGGVSSGGWVHSVSFSASGNKLAWVSHDSTVSVADASKNMSVS
QLKTEFLPLLSVIFVSENSLIAAGHDCCPMLFTYDEHGSLTFVSKLDIPKQSTQRNISAM
ERFRNMDKRATTEDRNTTLETLHQNSITQVSIYDGDKTECRKFCTTGIDGAMTIWDFKTL
ESYIQGLKIM
NT seq 1113 nt   +upstreamnt  +downstreamnt
atgtccttgcaccagtttttgcttgaacccattagctgccatgcctggaataaggatctg
acacagattgcaattagtccaaataaccatgaagtccatatctacaagaagagtggtgac
caatgggtgaaagggcatgagttaaaggaacacaatgggcacatcacaggcattgactgg
gctcctaaaagtgatcgtatagttacatgtggtgctgatcgtaatgcatatgtttggagc
caaaaggatggtgtatggaagccaacattggtgattctccgcattaaccgtgcagctacc
tttgtaaagtggtctcccctagaaaataagtttgcagtgggaagtggagcaagactcata
tctgtgtgctactttgaatctgaaaatgactggtgggtaagcaaacacatcaagaagcca
attcgttcaactgtgctgagcctggactggcatcccaacaatgtcttgctggcagctgga
tcctgtgacttcaagacaagggtcttctctgcatatattaaggaagtggatgaaaaacct
gcaagcactccgtggggatccaaaatgcctttcggtcagatgatggcagagtttggggga
gttagcagtggaggctgggtgcacagtgtcagtttctcagctagtggcaacaaacttgca
tgggtcagtcatgacagtactgtgtcagtagctgatgcttctaaaaacatgagtgtttcc
cagctgaagacggagtttcttcctttattaagtgtcatctttgtatctgaaaacagcttg
atagcagcgggccatgattgctgcccaatgctgtttacctacgatgagcatggttccttg
acttttgtttccaaactggacattcccaagcagagcactcagcgcaacatctctgccatg
gagcgatttcgcaacatggacaagagagctaccacagaagaccgaaataccacactggag
acccttcatcagaacagcatcacccaagtgtccatctatgatggtgacaagactgaatgt
cgcaagttctgtactacaggaattgatggagcaatgactatctgggattttaagaccctg
gagtcatacattcaaggtctcaagattatgtga

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