Xenopus laevis (African clawed frog): 379859
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Entry
379859 CDS
T01010
Symbol
odc1.L, odc, odc1, odc1-a, odc2, xodc2
Name
(RefSeq) ornithine decarboxylase 1
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla00330
Arginine and proline metabolism
xla00480
Glutathione metabolism
xla01100
Metabolic pathways
xla04148
Efferocytosis
Module
xla_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
379859 (odc1.L)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
379859 (odc1.L)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
379859 (odc1.L)
Enzymes [BR:
xla01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
379859 (odc1.L)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
AP_endonuc_2
DUF5448
Motif
Other DBs
NCBI-GeneID:
379859
NCBI-ProteinID:
NP_001080167
Xenbase:
XB-GENE-856383
UniProt:
Q7ZY28
A0A974HKK4
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Position
5L:complement(149419168..149425673)
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AA seq
460 aa
AA seq
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MNSFSNDDFDFSFLEEGFSARDIVEQKINEVSLSDDKDAFYVADLGDIVKKHVRWFKALP
RVTPFYAVKCNDGKAIVKTLSILGAGFDCASKTEIQLVQSIGVSPERIIYANPCKQVSQI
KYAASCGVEKMTFDSEVELMKVARNHPNAKLVLRIATDDSKAVCRLSVKFGATLKTSRLL
LERAKELNVDIIGVSFHVGSGCTDPQTYVQAVSDARCVFDMGAELGFNMHLLDIGGGFPG
SEDVKLKFEEITSVINPALDKYFPADSGVKIIAEPGRYYVASSFTLAVNIIAKKVMVNEQ
SGSDDEEDAANDKTLMYYVNDGVYGSFNCILFDHAHVKPVLTKKPKPDEKFYSSSIWGPT
CDGLDRIVERFELPELQVGDWMLFENMGAYTVAAASTFNGFQRPTLYYVMSRPHWQLMHD
IKEHGILPEVPDLSALHVSCAQESGMELAPAVCTAASINV
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcttcagcaatgacgactttgacttcagcttcctggaggaaggcttctctgcc
agggatattgtggagcaaaagatcaatgaagtgtccttatctgacgacaaagatgccttt
tatgttgctgatcttggcgacattgtgaaaaagcatgtgcgttggtttaaagcgctcccc
cgtgtcactccgttttatgccgtaaaatgcaacgatggcaaagccattgtgaagactctc
tccattcttggtgccggctttgactgtgccagtaagactgaaatccaactagtacagagt
attggagtttcccccgagcggattatctatgcaaacccgtgtaaacaagtttcccagatc
aaatacgcagctagctgtggtgtggagaagatgacttttgatagtgaagttgaattgatg
aaagtggcaaggaatcacccgaatgcaaagcttgttctacgcatagcaactgatgactca
aaagcagtctgccgcctcagtgtgaaatttggtgccacccttaaaacaagcaggctgctt
ctggagcgggcaaaggagcttaatgtggatataattggtgtgagtttccatgttggcagt
ggctgcactgatccacagacttatgtacaagctgtctcagatgcacgatgtgtctttgac
atgggggctgagcttggctttaacatgcatctacttgatattggtggtggattccctggt
tcagaggatgtgaaactgaagtttgaagagatcacatctgtgataaacccagccctggat
aaatacttcccagcagattctggcgttaaaatcattgcagagcctgggagatactatgtt
gcctcatctttcaccctggcagttaatatcattgccaagaaagttatggtgaatgagcaa
agtggatctgatgatgaagaagatgctgccaatgacaaaactctgatgtactacgtcaat
gatggagtgtatggatctttcaactgcatcttgtttgatcatgcacatgtcaagccagtt
ctaacaaagaaacccaaaccagatgagaagttctactcgagcagcatttggggaccaacg
tgtgatgggctggatcgtatcgtagaaaggtttgagctgccggagctgcaagttggagac
tggatgttgtttgaaaacatgggtgcctacactgttgctgcagcctcgacattcaatgga
tttcagagaccaaccctttattatgttatgtcaagaccacactggcaactgatgcatgat
attaaagaacatggcattctccctgaagtaccagatctgagtgcactccatgtatcctgt
gctcaggagagcggaatggaacttgcacctgctgtctgtactgctgccagcatcaatgta
tag
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