Xenopus laevis (African clawed frog): 379889
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Entry
379889 CDS
T01010
Symbol
katnb1.S, katnb1
Name
(RefSeq) katanin regulatory subunit B1 S homeolog
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xla04812
]
379889 (katnb1.S)
Cytoskeleton proteins [BR:
xla04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
379889 (katnb1.S)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Katanin_con80
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_Vps41
Beta-prop_HPS5
eIF2A
RMC1_N
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_RIG_1st
Beta-prop_DCAF12
VPS8_N
Beta-prop_WDR35_TULP_N
Beta-prop_NWD2_C
Beta-prop_VPS8
Beta-prop_LRRK2
Beta-prop_IP5PC_F
WD_LRWD1
PD40
Motif
Other DBs
NCBI-GeneID:
379889
NCBI-ProteinID:
NP_001080197
Xenbase:
XB-GENE-17335261
UniProt:
Q7ZYI4
LinkDB
All DBs
Position
4S:55170653..55194888
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AA seq
655 aa
AA seq
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MASPSTTKTTWKLQEIVAHGSSVSSVALGKSSGRLVATGGEDCRVNLWSVNKPNCIMSLT
GHTTPVESVRFNNSEELIVAGSQSGSLRIWDLEAAKILRTLMGHKANVCSLDFHPYGEFV
ASGSLDTNIKLWDVRRKGCVFRYKGHTQAVRCLRFSPDGKWLASTSDDHSIKLWDLTAGK
MMAELSEHKGPVNIIEFHPNEYLLASGSADRTVRFWDLEKFQLIGCTEGETIPVRAILFS
NDGGCIFCGGKDALRVYGWEPDQCFDSVPVGWGKVSDLAICNNQLIGVSSAQSNISSFVV
DLNRVKMTGCAPQGSVPAEIPIGQSAPTGTSLRRIYERPSTTCNKPKRVSPTSDDEEKES
RAEIQNQEDYTEIFQPKSAISRTPPRNSEPFPAPPEDDTSIVKEAVAPTPDVVTPAIINK
KNTELLQRPPVVASTPIECQEPNPVPAPQSKPPVISAARNEPIGLKAADFLPAFKSSSPT
EVVDDEAVSQIQKGHDTMCMVLTSRMHNLDTVRAVWSSGDIKTSIDSAVAINDLSVVVDL
LNIVNQKASLWKLDLCLTVLPQIEKMLQSKYESYVQTGCISLKLILKRFLPIITDILAAP
PSVGVDISREERLSKCKLCYKQLRVLSPLVKSKASQSGRYGSAFRELHILMSGLE
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaccttccactacaaaaacaacatggaagctgcaagaaattgttgcccatgga
agcagtgtgtcttctgtggctttgggaaagagttctggtcgtctggtggccacaggagga
gaggattgtcgtgttaatctttggtctgttaataaacctaactgcattatgagtctaact
ggacatactactccagtggagagcgtgcgtttcaataactctgaagaattaattgtggct
ggctcacagtctggatctttgcgaatttgggatctagaagcagctaaaattctgaggaca
ctaatgggacacaaagccaatgtctgcagcctggattttcatccttatggggagtttgta
gcatctgggtccctggacaccaacataaaattatgggatgtgcgcaggaaaggctgtgtt
tttcgttataagggtcatacacaagcagttcgttgtctccgtttcagtccagatggaaag
tggttggcatccacttcagatgatcattctataaagctttgggacctgactgcaggaaaa
atgatggctgaattatcagaacataaaggacctgttaatattatcgagtttcatcccaat
gaataccttttggcatcgggaagtgcagaccggactgtacgcttctgggacctagagaaa
ttccagctgatcggatgtacagagggagaaacaattcctgtaagggcaatccttttcagc
aatgatggtggttgcattttctgtggagggaaagatgcactgcgggtatatggctgggag
ccagaccagtgctttgactctgttcctgtaggatggggcaaagtttcagacctggccatc
tgtaacaaccagctgattggagtctccagtgcccagtccaatatctcctcatttgtggtt
gacttgaatcgagttaaaatgactggctgtgccccacaagggtctgttcctgcagagata
cctatcggccaatctgctccaactggaacctcacttaggcgaatatatgagcgtccctct
actacctgtaacaagccaaagagggtaagtcctacaagtgatgatgaggagaaagaatcc
agagctgagatccaaaaccaagaggactacacagaaatctttcagccaaaaagtgcaatc
tccaggacacccccacggaatagtgaaccattcccagctccacccgaggatgatacaagt
attgtaaaggaagctgtagcacccaccccagatgtagtgacccctgcaattatcaacaaa
aaaaatactgaacttctgcaacgtcctccagtggttgcttctacgcccattgaatgtcag
gagccaaatcctgttccagcacctcaaagcaagcctccagtgatatctgctgcaaggaat
gagcccattggacttaaagcagctgattttctgccagcttttaagagttcatctccaacc
gaagtggttgatgatgaagccgtgtcccagattcaaaagggacatgacacaatgtgcatg
gtgttaacaagtcgaatgcataacctggatactgtgagggccgtttggagttcaggagac
atcaagacatctatagattctgctgtggccattaatgatctctcggttgttgtggatctt
ctaaacatcgttaaccagaaagcgtctttgtggaagctggacctctgtttgactgtttta
cctcagattgaaaaaatgttacagagcaagtatgagagttatgtacagactggctgcatc
tcacttaaactgattctaaagaggtttctcccgataatcactgatatcttagccgcacct
ccatctgtcggtgtggacatatctcgtgaggaaaggctttccaagtgcaaattatgttac
aagcagctgcgtgttctcagtccgctagtgaaaagcaaggcttcgcagagtggccgctat
ggaagtgccttccgagaactacacatactcatgtctgggctggagtaa
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