Xenopus laevis (African clawed frog): 379913
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Entry
379913 CDS
T01010
Symbol
copb2.S, copb2, copb2.L, wu:fc55e05
Name
(RefSeq) COPI coat complex subunit beta 2 S homeolog
KO
K17302
coatomer subunit beta'
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
379913 (copb2.S)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xla04147
]
379913 (copb2.S)
Membrane trafficking [BR:
xla04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
379913 (copb2.S)
Exosome [BR:
xla04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
379913 (copb2.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR75_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
NBCH_WD40
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_SCAP
PEP5_VPS11_N
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_LRRK2
Beta-prop_WDR35_TULP_N
HEAT_GCN1
Clathrin
Motif
Other DBs
NCBI-GeneID:
379913
NCBI-ProteinID:
NP_001080221
Xenbase:
XB-GENE-964673
UniProt:
Q7ZTR0
LinkDB
All DBs
Position
5S:complement(115924357..115948464)
Genome browser
AA seq
915 aa
AA seq
DB search
MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEICDLPV
RAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDD
MLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVSFHPE
LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVSGLRGSNNVALGYDEGSIIVKLG
REEPAMSMDANGKIIWAKHSEIQQANLKAMGDTEIKDGERLPLAVKDMGSCEIYPQTIQH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFAWAHDSSEYAIRESNSVVKIFKNFKE
KKSFKPDFGAEGIYGGFLLGVRSVNGLAFYDWENTELIRRIEIQPKHIFWSDSGELVCIA
TEESFFILKYVSEKVATAQETHEGVSEDGIEDAFEVLGEIQEIVKTGLWVGDCFIYTSTV
NRLNYYVGGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKELNIVSYSLLVSVLEYQTAVMR
RDFSMADKVIPTIPKEQRTRVAHFLEKQGFKQQALAVSTDPEHRFELALQLGELKIAYQL
AVEAESEQKWKQLAELAISKCQFGLAQECLHSAQDYGGLLLLATSSGNATMVNKLAEGAE
KDGKNNVAFLSYFLLGKLDTCLEMLISTGRLPEAAFLARTYLPSQVSRVVQLWKESLGKV
NQKAADSLADPTEYENLFPGLKEAYAAEPFLKQKTSMLLPAKEYRHVTPNEERNVLSEAK
GFDPPESAFTTVEKESEEAVPVPITVPSPSVAAPEIPAPKSDMDKALFDLDEDLDNMELD
DIDTTDINLDDELSD
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgcgacttgacatcaagagaaaacttactgctcggtctgaccgagtgaagagt
gtggacttgcacccaacggagccatggatgttggctagtttatacaatggcagtgtgtgt
gtatggaatcatgaaacacagacgttggtgaaaacctttgaaatctgtgaccttccagtg
agagcagcaaaatttgtggcccgaaaaaactgggttgtcacaggagctgatgacatgcag
ataagggttttcaactacaacactctggagagagttcatatgtttgaagctcattctgat
tatatacgatgcattgccgttcacccaacacagcctttcattctgacgagcagtgatgat
atgttgatcaaactgtgggactgggataagaaatggtcatgctcccaggtcttcgaaggt
cacacacactacgtcatgcagattgttataaatcccaaggacaacaaccagtttgccagt
gcttctttggatcgcacaatcaaggtctggcagctgggttcctcttctccgaattttact
ttggagggacatgagaaaggggtcaactgtattgattattacagtggaggtgacaagcct
tacctcatttctggggctgatgacagattggtgaagatttgggattaccagaacaaaaca
tgtgttcagacacttgagggtcatgcgcagaatgtttcttgtgtcagcttccaccctgag
cttccaattatcatcacaggctcagaagatggtacggtgagaatctggcactctagcact
taccgccttgagagtactctaaactatggcatggaaagggtatggtgtgtgtctggactt
cgaggctccaacaatgtggcacttggatatgatgaaggcagcatcattgttaagttgggc
cgtgaagaaccagcaatgtccatggatgccaatgggaaaattatttgggctaagcactct
gagattcagcaagcaaatctgaaggccatgggggatacagagattaaggatggggagagg
cttccacttgctgtgaaggacatgggcagttgtgaaatctacccccagacaattcaacac
aaccctaatggaagatttgtagtggtgtgtggagatggagaatacattatttacactgct
atggcactgcgtaacaagagctttggttcagcacaggaatttgcctgggctcacgactct
tctgaatatgctattcgagaaagcaacagcgtggtaaagattttcaagaactttaaggag
aagaagagctttaaaccagactttggggcagaaggtatctatggtggattccttcttggt
gtacggtctgttaacggtttggctttctatgactgggagaatacagagctcatccgcagg
attgaaatccaacccaaacacattttctggtcggattctggggagcttgtatgcattgct
acagaggaatccttcttcatcctcaaatatgtatcagagaaagtagccacagcacaggag
acccatgagggagtttcagaggatggaatagaagatgcttttgaggtcctaggagaaatt
caggaaatagttaaaactggtctgtgggttggagactgttttatatacacaagcacagtg
aacagactcaactactatgtgggaggagagattgttaccattgcacacttagatagaacc
atgtacctgcttggttacatacccaaagataaccgcctctatcttggagacaaagagctt
aatattgtcagttactcactgctggtatcagtcttggaatatcagacagctgtcatgagg
agagacttcagcatggctgacaaagtaatcccaactatccccaaagagcagaggactcga
gttgctcactttctggaaaaacagggtttcaaacaacaggctttggctgtgtctacagat
cctgaacatcgctttgagctagcactgcagctgggagaacttaagattgcctaccagcta
gctgtggaagcagagtccgagcagaagtggaagcagctggcagaattggccatcagcaaa
tgtcaatttggattggctcaagagtgcctacatagtgcccaggattatggagggctctta
ctcctagccacctcttcaggaaatgccaccatggtaaataagctggctgaaggagcagag
aaagatggcaaaaacaacgtggctttcctgagctatttcttactaggaaaattggacact
tgcttggagatgctcatttctacaggccgcctgcccgaggcagcttttctggcacggacc
tacctgccaagtcaggtgtccagggtggtacaattatggaaagagagcctaggcaaggtc
aaccagaaggcagcagactctttggctgaccccactgaatacgaaaacctctttcctggt
ctaaaggaagcctatgctgcagagccatttttaaagcagaaaacaagcatgctgctccca
gctaaggaatatcgtcatgtgactccaaatgaagagagaaatgtcttgtctgaagcaaag
gggtttgatccaccagaatcagccttcacaaccgtagaaaaggagagtgaagaagcagtt
cccgtccctatcacagtaccatctccatcagtagcagccccagaaattcctgcacctaaa
agtgacatggataaggcattatttgacctagatgaggatttggacaacatggagctggat
gacattgacaccacggatatcaacttggatgatgagctttctgattaa
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