Xenopus laevis (African clawed frog): 379969
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Entry
379969 CDS
T01010
Symbol
gtf2h1.L, gtf2h1
Name
(RefSeq) general transcription factor IIH subunit 1 L homeolog
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03022
Basal transcription factors
xla03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
379969 (gtf2h1.L)
09124 Replication and repair
03420 Nucleotide excision repair
379969 (gtf2h1.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xla03021
]
379969 (gtf2h1.L)
03400 DNA repair and recombination proteins [BR:
xla03400
]
379969 (gtf2h1.L)
Transcription machinery [BR:
xla03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
379969 (gtf2h1.L)
DNA repair and recombination proteins [BR:
xla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
379969 (gtf2h1.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSD
PH_TFIIH
Motif
Other DBs
NCBI-GeneID:
379969
NCBI-ProteinID:
NP_001080277
Xenbase:
XB-GENE-6078343
UniProt:
Q7ZX12
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Position
4L:complement(523377..531489)
Genome browser
AA seq
532 aa
AA seq
DB search
MATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFIISHTYADIKCQKISPDGK
AKVQLQLVLHSGENSNFHFSNDVTAIKERDAVKELLQQLLPKFKRKANKELEEKNRMLKE
DPVLFQLYKDLVVSQVISAEEFWANRLSLSSVESGVSASKQDVGISAAFLADVRPQTDGC
NGLRYNLTSDIIESIFRTYPAVKLKYAENVPHNMTEKDFWKQFFQSHYFHRDRLNSGAKD
LFAECAKMDEKGLKSMVSQGVKNPMLDLMALEDKCLDEGYGISSAPSTSSSKSIKENSNA
AIIKRFNHHSAMVLAAGLRKEEAQSDQCSETSSTDGNSRDSDFFLPPVKKVKLQEAIEYE
DLDQTNGMKPIVLNLKKSDRYYHGPTPIQSQQYASSQDILSSFHSIKLQMENYTPRLTQV
LSSGAASSTTAALTPGGSLMQGVTQQAINQLVPNDIQVELKHLYVAVGELLRHFWSCFPV
NTLFLEEKVIKMKSNLERFQVTKLRPFQEKLRKQYLGTNVRAAGGFWGRSWG
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggccacctcctcagaagaagttttactgatcgtgaagaaggtgcggcagaagaagcag
gatggggccctttatctcatggccgagaggatcgcctgggcccccgagggcaaggaccgc
ttcatcattagccacacgtacgccgatatcaaatgtcagaaaatcagccccgatgggaaa
gcgaaggtgcagctccagcttgtgctccactctggggagaatagcaacttccacttctct
aacgatgtcactgccatcaaagagcgagatgccgtcaaagagcttctgcagcagctgctc
cccaaattcaagaggaaagccaataaggaactggaggagaagaacagaatgctgaaggaa
gatccagtcttattccagctgtataaagatctagttgtgagtcaggtgatcagcgccgag
gagttttgggccaatcggttaagcctgagctcagtggagagcggtgtgtcggcgagtaaa
caagacgtgggaatatcggcggcgtttctggcagatgttcggccacaaaccgacggctgt
aacggcctcagatacaacctgacgtctgacatcattgagtccatattccgcacgtatccc
gcagtgaagctgaaatacgcagagaacgtgccgcacaacatgactgagaaggatttctgg
aagcagtttttccagtctcattatttccaccgggaccggctgaactccggagccaaagat
ctgtttgctgagtgcgccaagatggatgagaaagggctaaagtccatggtgtctcagggg
gtgaagaacccgatgttggatctgatggcgctggaggacaagtgcttggatgagggctac
ggaatctcatcagcaccttccacgtccagcagcaaatccatcaaagagaacagcaacgcc
gccatcatcaagcgatttaaccatcacagcgccatggtgctcgccgccggcctcaggaag
gaggaggcgcagagtgaccagtgcagtgagaccagcagcacagacggcaattccagagac
tccgatttctttctgcctcctgtcaaaaaggtgaagttacaggaggccatagaatatgag
gatttggaccagactaatggaatgaaacccattgtgctgaatctgaagaaatctgacagg
tattatcatggtccgacgccgatacagtcccagcaatatgcctccagccaggatattctc
agctctttccatagtattaaactacaaatggaaaactataccccaaggcttactcaggtt
ctgtcgagtggtgctgccagtagtacgactgctgctctgaccccgggggggtcgctgatg
cagggtgtcactcagcaagccataaaccagttggtgccaaacgacattcaggtagagctg
aagcacctgtacgtggcagttggggagctgctgcgccatttctggtcctgcttcccggtc
aacaccctcttcctagaggaaaaggtgattaaaatgaagagcaacttggagcggttccag
gtgacgaagctgcgtcctttccaggagaagctccggaagcagtacctggggaccaatgta
agggcagctggggggttctggggcaggagctggggttaa
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