Xenopus laevis (African clawed frog): 380042
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Entry
380042 CDS
T01010
Symbol
shoc2.S, shoc2
Name
(RefSeq) leucine-rich repeat protein SHOC-2
KO
K19613
leucine-rich repeat protein SHOC2
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
380042 (shoc2.S)
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GFIT
Motif
Pfam:
LRR_8
LRR_14
LRR_4
LRR_LRWD1
LRR_9
LRR_13
LRR_NLRC4
LRR_At5g56370
LRR_5
Motif
Other DBs
NCBI-GeneID:
380042
NCBI-ProteinID:
NP_001080350
Xenbase:
XB-GENE-493506
UniProt:
Q8AVI4
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Position
7S:complement(1107983..1126327)
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AA seq
577 aa
AA seq
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MSSSAGKDKEPKVSSGTKEREKEAKAVGPVKESKDKDLKSKVKDAKEGKRDPVGAQAGVA
FSLDNTIKRANPASGMRKKASNAEVIKELSKCREENSTRLDLAKKSIHMLPVSIKDLTQI
TELYLYGNKLQSLPAEVGNLVNLVKLALSENSLTSLPDSLDNLKKLCMLDLRHNKLREIP
PVVYRLSSLTTLFLRFNRITAVEKDLKMLPKLTMLSIRENKIKHLPAEIGELCNLITLDV
AHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAVPRSLSK
CSELDELNLENNNISTLPEGLLSSLVKVNSLTLARNCFQSYPVGGPSQFSSIYSLNMEHN
RINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLV
SIEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTT
LPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSI
MSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAMV
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtagcgcaggaaaagataaggagcccaaggtgagctccggcactaaagagaga
gagaaggaagccaaagccgtggggccggtgaaggagagtaaagacaaggaccttaagagc
aaagtgaaagatgccaaagagggtaagcgagaccccgttggagcccaggcaggtgtggca
ttttcactggacaataccattaaacgggcaaaccctgcgtcagggatgcgtaaaaaagcc
agcaacgccgaggtgatcaaagaactgagcaagtgccgggaggagaactccactcgcttg
gatctggccaagaagtccatacacatgcttccagtttccattaaagacctgacgcagatc
acagaactgtatttatacggaaacaagctgcagtccctgccggccgaggtgggcaacctt
gtgaacttggtcaagttggcccttagcgagaactccctgactagccttcccgactccctg
gataacttaaagaagctgtgcatgctggacttgcggcacaacaagctgcgggagatcccg
cccgtcgtctacaggctgagttctctcaccacgctgtttttacggttcaaccgcattacc
gcggtggagaaggacctcaaaatgctgccgaagctcaccatgttgagcatacgggagaac
aagatcaaacacctgcctgcggaaattggggagttgtgtaacctgattacactggatgtg
gctcacaatcagctggagcaccttcccaaggagatcggcaactgcacccagatcaccaac
ctcgacctgcagcacaatgagctcctggatctaccagacacaataggaaacctgtccagc
ctgagtcgtctcggcctgcgatataacagactgtctgccgtaccccgatccttatccaag
tgcagcgagctggacgagctcaatctggaaaataacaatatttccactttgccagagggg
cttctctccagcctagtgaaagtgaacagcttaaccctggcccgaaactgtttccagtct
tacccagtgggggggccctcccagttctcctctatttactccctcaacatggagcacaat
cgcattaacaagatcccatttggaatcttttcaagagcgaaagtattgagtaagctgaac
atgaaggacaatcagctgacttctctccccctggattttggaacctggacaagtatggtg
gaattaaatctggctactaatcaattaacaaagattcccgaggatgtatctggccttgtc
tctatagaggttctcattctctccaacaacctcctgaagaagctgccacacggtattggg
aacctgcgcaagctgagagaactggaccttgaagagaacaagctggagtccctgcctaat
gaaattgcctatctcaaggatctgcagaaattggtcctcactaataaccagttaaccacg
ttacccagaggaatcggccacctcaccaatctcacgcaccttggccttggggaaaacctc
ctcacccatcttccagaagaaataggtacactggagaatttggaggagctgtatctgaac
gataaccccaatttacacagcctcccctttgagctcgctctgtgcagcaaactgtccatc
atgagtattgagaactgtccgctcagccaccttcccccccagattgtcgctgggggcccg
tcattcatcattcagttcttgaaaatgcaaggtccttatcgtgccatggtctga
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