Xenopus laevis (African clawed frog): 380112
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Entry
380112 CDS
T01010
Symbol
tgif1.S, tgif, tgif1
Name
(RefSeq) TGFB induced factor homeobox 1 S homeolog
KO
K19383
homeobox protein TGIF1
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
380112 (tgif1.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
380112 (tgif1.S)
Transcription factors [BR:
xla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
380112 (tgif1.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Homez
Motif
Other DBs
NCBI-GeneID:
380112
NCBI-ProteinID:
NP_001080420
Xenbase:
XB-GENE-853028
UniProt:
Q7ZY20
A0A974CJY7
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Position
6S:complement(93032312..93047818)
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AA seq
272 aa
AA seq
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MKAKKGLVPLSGSETEDDDGMDIPLDLSSTAGSGKRRRRGNLPKESVQILRDWLYEHRYN
AYPSEQEKALLSRQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQFTISRKGAKISDV
IQMDSPTGTKPYIPTIDENSFHFTSAGANQSSGKLLASKLSPPQSLLARPSVICHTTVTS
LSDAPFNFTHVLNAGQIPEAQQTDANNFTETSILYHEDTSKSGQNTNAQSGLFNTPPPTP
PDHNQDFSGFQLLVDVALKQAAEMELQAKLMA
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgaaagccaagaaaggcttagttccactatcaggcagtgagacagaggatgacgatggt
atggatatcccactggatctttcttccactgctggctcagggaagaggaggagacgtgga
aacttgcctaaggaatcggtgcagattctgcgggactggctctatgaacaccgctacaat
gcctatccctctgagcaagagaaagcactcctgtcccgtcagacacatctctccacacta
caggtttgcaattggttcatcaatgcgcgccgcagactgttgcctgatatgctaagaaaa
gacgggaaggaccctaatcagttcaccatttctcggaagggggccaagataagcgacgtg
atccagatggattctccaacaggcacaaagccgtacattcccactatagacgagaactcc
tttcatttcacttcagcaggagccaatcagagctcagggaagttactggcctctaaactc
tctcctccacaatctctgctcgctcggccttctgtgatctgtcataccactgtaacgtca
ctaagtgacgcgcctttcaatttcacccatgtgttgaacgctggacaaatcccagaagcg
cagcagaccgacgcaaacaacttcacagaaacctccattttgtaccacgaagacactagt
aaatcgggacaaaacacaaatgcacagagtggacttttcaacactccacccccaactccc
ccagaccataaccaggatttcagtggctttcagttattggtggatgttgctctcaaacag
gcggcagagatggagctgcaggctaaacttatggcctaa
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