Xenopus laevis (African clawed frog): 380141
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Entry
380141 CDS
T01010
Symbol
hif1a.L, hif-1alpha, hif1a, hif1alpha, xhif1a
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha L homeolog
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04137
Mitophagy - animal
xla04140
Autophagy - animal
xla04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
380141 (hif1a.L)
04137 Mitophagy - animal
380141 (hif1a.L)
04148 Efferocytosis
380141 (hif1a.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
380141 (hif1a.L)
Transcription factors [BR:
xla03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
380141 (hif1a.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
HIF-1
PAS
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
380141
NCBI-ProteinID:
NP_001080449
Xenbase:
XB-GENE-946628
UniProt:
Q6PI54
A0A974C9G2
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All DBs
Position
8L:complement(93260738..93298830)
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AA seq
802 aa
AA seq
DB search
MEGSVVVNEKKRISSERRKEKSRDAARCRRSKESEVFYELCHELPLPHNVSSNLDKASIM
RLTISYLQIRKLLDAGDLDGETELDKQLNCFYLKALEGFVLVLTEEGDMIYLSENVNKCM
GLTQFELTGHSVFDFTHPCDHEELREMLTFRNGPAKKGKEQITERSFFLRMKCTLTSRGR
TVNIKSATWKVLHCTGHMRVYDNANNQNHCGYKKPPMTCMVVICEPIPHPSNIEFPLDSK
TFLSRHSLDMKFSYCDERVTELVGYEPDELLGRSVYEYYHALDSDHLTKAHHNMFTKGQV
TTGQYRMLAKKGGYVWVETQATVIYNSKNSQPQCIVCVNYVLSEVVEKDLILSLGQTASV
LIPVESQEIKMPEIFTELNEENNSECLFDKLKQEPESLTVLAPDAGDEIIPLDFSSGDSD
KPYEDVPLYNDVMLHSTSNKLESTPITPLPAPEMPKPLRSNVDPALNREVVIKMESNPEQ
LELAFTIPQLSKPDSPSDISSSQSSTEPNTPEYCFDVDSEMASEFKLDLVEKLFAIDTEA
KAPFTTQETDLDLEMLAPYIPMDDDFQLRTFDQLSSLECDSSIPQTLGSMTTLFHQSLSP
STSDFKPEDAMSDLKTIIQSPVHMMKESTSAPVSPYNGNRSRTSSPVRPAKAVVDKTEKS
RPGTPNLPVPLNKRCTILDEELNPKMIALHNVQRKRKMESDGPLFQAIGIGTLFQTNVDP
GPNSSLQWKRVKGSDSERLSSAEQRTILLLSTDMASQLLGQSFDGTVLPQLTGYDCEVNA
PVHGTRNLLQGEELLRALDQAN
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atggagggatcagtagtagtgaacgagaagaaaaggatcagctcggagcggcgtaaagaa
aaatcacgcgatgctgccaggtgtcggaggagtaaggagtctgaggtcttttatgaacta
tgtcacgagttgcctctgccgcacaatgtcagctcaaatcttgacaaggcctctatcatg
aggctgaccatcagttacctgcagataagaaagttgcttgatgcaggggatttggatggt
gagactgagctggacaagcaactcaattgtttctatttgaaggcactggaagggtttgtc
ttggttctgactgaagagggggatatgatttatctatctgaaaatgtcaacaagtgtatg
ggccttacacagtttgagcttactggacacagcgtgtttgattttactcatccttgcgat
catgaagagctaagggagatgctaactttcagaaatgggccagcaaaaaaaggaaaagaa
caaatcacagagagaagtttcttccttcgtatgaaatgtacattaaccagtcgtggaaga
accgtgaatataaagtcagccacatggaaggtccttcactgtacaggacacatgcgtgta
tatgataatgcaaacaaccagaaccattgtggctacaagaaacctcccatgacatgcatg
gttgtaatctgtgaacctattcctcatccatcgaatattgagttccccttggacagcaag
accttccttagtcgccacagccttgacatgaagttttcctactgtgatgaaagggtaact
gaattagtaggatatgaaccagatgaacttttggggcgttcagtctatgaatattatcat
gccttggactctgatcatttgaccaaagctcatcataatatgttcacaaagggacaggtg
actactgggcagtacagaatgcttgcaaaaaaaggtggttatgtctgggttgaaacacaa
gccactgttatatacaattctaagaactctcaaccacagtgcattgtctgtgtaaactat
gtactcagtgaggtggtggagaaagatttgatcttgtccctgggtcagacagcaagtgtt
ttgattccagtggaatcacaagagataaagatgccagaaatcttcacagagctgaatgaa
gagaacaattctgagtgcttgtttgataaactgaagcaggagccagaatctcttacagtt
cttgcacccgatgctggggatgaaattattccattggatttcagttcaggtgattctgac
aaaccatacgaagatgttccactttacaatgatgtaatgcttcactctaccagtaataaa
ctggaaagtacaccaatcactcctctcccagccccagaaatgccaaagcctttgcgtagc
aatgtcgaccctgcacttaaccgggaagttgtgataaagatggaatcaaatccagaacaa
cttgagctagcattcaccattccacagctatccaagccagacagcccttcagatatcagt
tccagtcagagctcaactgagcctaatacaccagaatattgctttgatgtcgacagcgaa
atggcaagtgagttcaagctggatttggtggaaaaactgtttgcaatagacacagaagca
aaagcaccttttactacccaggaaactgatttagacttggagatgttggcaccgtatatt
cctatggatgacgattttcagttacgaacctttgaccaactttcatctttggaatgcgat
tcatcaattccgcaaaccttaggaagcatgaccactctatttcatcagtctctttcgcca
tccaccagtgatttcaagccagaggatgccatgagtgatcttaaaaccattattcagtca
cctgtccacatgatgaaagagtccaccagtgctccagtatcaccatataatggaaacaga
agccgcacaagttcaccagtaaggccagccaaagcagtggttgataaaactgagaaatca
cgtccaggaactccaaatttacctgttccgttaaataaaaggtgtacaatattggatgaa
gaactgaatccaaagatgattgctttacacaatgtacagcgaaaacgtaaaatggaaagt
gatggcccacttttccaggctattggaattggtaccctcttccaaacaaatgttgatcct
gggccaaactcttctctccaatggaaacgtgtgaaaggatcagactcggaaaggctaagt
agtgcagagcaaagaacaatcctcttactgtcaacagatatggcaagtcagttgcttggg
cagtcttttgatggaactgttcttcctcagctgactggctatgactgcgaagtgaatgcc
cctgttcacggaaccagaaacttgctccaaggcgaagagttactaagagctctcgatcaa
gctaactga
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