Xenopus laevis (African clawed frog): 380245
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Entry
380245 CDS
T01010
Symbol
pdgfra.L, G37, pdgfr2, pdgfra, pdgfralpha
Name
(RefSeq) platelet-derived growth factor receptor alpha precursor
KO
K04363
platelet-derived growth factor receptor alpha [EC:
2.7.10.1
]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04010
MAPK signaling pathway
xla04020
Calcium signaling pathway
xla04144
Endocytosis
xla04510
Focal adhesion
xla04540
Gap junction
xla04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
380245 (pdgfra.L)
04020 Calcium signaling pathway
380245 (pdgfra.L)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
380245 (pdgfra.L)
09144 Cellular community - eukaryotes
04510 Focal adhesion
380245 (pdgfra.L)
04540 Gap junction
380245 (pdgfra.L)
09142 Cell motility
04810 Regulation of actin cytoskeleton
380245 (pdgfra.L)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
xla01001
]
380245 (pdgfra.L)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
xla04090
]
380245 (pdgfra.L)
Enzymes [BR:
xla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
380245 (pdgfra.L)
Protein kinases [BR:
xla01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
380245 (pdgfra.L)
CD molecules [BR:
xla04090
]
Proteins
380245 (pdgfra.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
I-set
Ig_3
ig
Ig_2
VEGFR1-3_N_Ig-like
V-set
VEGFR-1-like_Ig-like
DUF6232
Motif
Other DBs
NCBI-GeneID:
380245
NCBI-ProteinID:
NP_001080553
Xenbase:
XB-GENE-6072934
UniProt:
Q7ZY71
LinkDB
All DBs
Position
1L:41756745..41782987
Genome browser
AA seq
1087 aa
AA seq
DB search
MMPAMRASLILGCLLIIGPWAILAENPLPTIFPDKDELVQALHSSFTLKCTGESEVSWQN
PNSNPEKQNVVIRSEENNSGLFVSILEVSDASAFDTGLYTCYHNHTQTEESEIEGTDIYI
YVPDPNVPFAPPGLFDHIIVVEEDESALVPCRTTDPSSEVMLKNIESSRTVFAFYDSKQG
FAGNFPPGSYICETTSNKMVYQTEPYILQTWKATHNISVEMEAPKTMFRAGETIAIDCIV
LDNEVVDLKWTYPGKQRGVGIRNVEESKVPYQRLVYTLTLANATTEDSGEYECAVIHATL
DNRVVKKTNITVHEKGFIDLEPMFGSEEFANLHEVKSFIVNLHAYPTPGLFWLKDNRTLS
ENLTEITTSIVTTKETRFQSKLKLIRAKEEDSGLYTLVAQNDAETKSYSFMLQIKVPALI
LELVDKHHGASGEQTVGCLAKGMPVPDVEWLVCKDIKRCNNDTLWSILATNGSEISMETH
QDDEQIESQVTFKKIEETMAIRCIAKNELGVVARELKLVAPTLRSELTVAAAVLVLLVIV
IISLIVLVIIWKQKPRYEIRWRVIESISPDGHEYIYVDPMQLPYDSRWEFPRDGLVLGRI
LGSGAFGKVVEGAAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGAHLNIV
NLLGACTKSGPIYIITEYCFYGDLVNYLHKNRDNFQSRHPEKPKKDLDIFGLNPADESTR
SYVILSFENNGDYMDMKQADTMQYVPMLEMKEPSKYSDIQRSLYDRPASYKKKPLSEVKN
ILSDDGFEGLTVLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAHGKIVKICDFGLA
RDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSFGILLWEIFSLGGTPYPGMI
VDSTFYNKIKSGYRMTKPDHATHEVYDIMVKCWNSEPEKRPSFGHLSDIVESLLPTEYKR
CYETVLHDFLKSDHPAVTRMRSDSDNSYIGVTYKNEHKMKDRESGFDEQRLSADSGYIIP
LPDIDPVSDDESGKRNRHSSQTSEESAIETGSSSSTFIKREDETIEDIEMMDDIGIDPSD
LVEDSFL
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgatgcctgccatgagggcatctcttattttgggatgtctcctgattataggtccgtgg
gcaattcttgctgaaaatcctttgcccaccatatttcctgacaaggatgagttggttcag
gcgttgcactcctcctttacactaaaatgcactggcgaaagtgaggtgagctggcagaac
cccaattccaatcccgagaagcaaaatgtagtcattcgaagtgaagaaaacaacagcggc
ctctttgtgtccattctggaagtgagcgatgcgtctgcctttgatacgggactttacacc
tgctaccacaatcacacccagactgaggagagtgagattgaaggcacagatatctacatc
tatgtcccagatcctaatgttccttttgctccccctgggttatttgaccatattatcgtg
gttgaggaagatgagtctgctttggtaccttgtcgcactactgacccttcaagcgaagtg
atgctgaaaaatatagaaagttctagaactgtcttcgccttttatgacagtaagcaaggg
tttgccggaaatttccccccaggatcgtacatctgtgaaacaacctccaacaaaatggtc
tatcagacagaaccttacattttacagacatggaaagcaactcacaacatttcagttgag
atggaagcgcccaagactatgttcagagctggggaaaccattgctattgactgcattgtg
ctggacaatgaggtggtagacttgaagtggacctacccaggaaaacagagaggggttggc
attagaaatgtcgaagaaagcaaggttccgtatcagcgactggtgtacactttaaccctc
gcaaatgccactacagaagactcgggagagtacgagtgcgccgttatacatgcaaccctc
gataaccgggtagtcaagaagacaaacataacagttcatgaaaagggattcattgacctg
gagcccatgtttggatcggaggaatttgccaatctccacgaagtgaagagctttatagta
aacctgcatgcgtatcccacccctgggctcttctggctgaaggacaaccggacactgagt
gaaaatctgacagagatcaccactagcattgttacaactaaagaaaccaggtttcagagt
aaacttaaactgatccgggccaaagaagaagacagtgggctatatactctggtggcacaa
aatgatgcagaaactaaaagttactcatttatgttgcagataaaagtaccagctttgata
ttggaactggttgataagcatcatggggcatctggtgaacagactgttgggtgcttagcc
aaagggatgccggtccctgatgtggaatggctggtctgcaaggacattaaaagatgcaac
aatgacaccttgtggtccattctggcaacaaatggatcagaaatcagtatggagacccat
caagatgatgagcaaattgaaagccaggtgaccttcaagaaaattgaggagacaatggca
atccgatgtatcgcaaagaatgaacttggtgttgtggccagggaactaaagttggttgca
cctaccctgcgttcggagctaactgtggctgctgctgtcttggtccttctggtgattgtc
atcatatccctcattgtacttgtcatcatatggaaacagaaaccaaggtatgaaataaga
tggcgagtaatcgagtccatcagcccagatggccatgaatatatctatgtggatccaatg
cagcttccttatgactctcggtgggagttcccaagagatggacttgttcttggtcgcatc
cttggctctggagcttttgggaaagtggttgaaggcgccgcatatggattaagtcgttct
cagccagttatgaaagttgctgttaaaatgttgaaacctactgcccggtcaagtgaaaag
caggcactgatgtccgaactgaagattatgacgcaccttggcgcacatctcaatatagta
aatttactaggagcctgtaccaagtcgggtccaatttatatcattactgaatactgcttc
tacggtgacctcgtgaattacctgcataagaaccgggataattttcagagccgacatcca
gagaaaccaaagaaggacttggatatctttgggctgaacccagctgatgaaagcacaaga
agctacgttattttatcatttgaaaacaatggcgactacatggacatgaaacaggctgac
accatgcagtatgtacctatgctggaaatgaaagaaccctccaagtattcagatatccag
agatccttgtatgaccgtcctgcatcgtacaagaagaagcctttatcagaagtgaaaaat
atcttgtctgatgatggattcgagggtctgacagtactggatttgctcagtttcacatac
caagttgcaaggggcatggagttcttagcctctaaaaattgtgtacatcgggatttggca
gctcgaaatgtcctattagcacatgggaaaattgtgaaaatctgtgactttggcctagcg
agagacatcatgcatgactccaactacgtatccaaaggcagcactttccttcctgtgaag
tggatggcacctgaaagcatcttcgataacttgtacacaactctcagtgatgtgtggtca
tttgggatcctgctatgggaaatattctctcttggtggcacaccataccctggcatgatt
gtagactcaactttctataataagataaaaagtggctacagaatgacaaaacctgaccat
gccacccatgaagtgtatgacatcatggtaaaatgctggaacagcgaaccagagaaaagg
ccatcatttggccatctgagtgacattgttgaaagtctacttcccacggaatacaaaagg
tgctacgagacagttcttcacgacttccttaaaagtgaccaccctgcagttacccgcatg
agaagtgacagtgacaattcctacattggggtgacgtataagaatgaacacaaaatgaag
gacagagaaagcggatttgatgagcagaggctgagtgctgacagcggttacattattccc
cttcccgatattgaccccgtctcagatgatgagtctggcaagaggaacaggcacagttct
cagacatcagaagaaagtgcaatcgagactggttccagcagttccacttttataaagagg
gaggatgagaccattgaagacattgagatgatggacgacattgggattgatccctcggat
ctagtggaggacagtttcctgtga
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