Xenopus laevis (African clawed frog): 380255
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Entry
380255 CDS
T01010
Symbol
hnrnpk.S, hnrnpk, hnrpk
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein K S homeolog
KO
K12886
heterogeneous nuclear ribonucleoprotein K
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
380255 (hnrnpk.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xla03041
]
380255 (hnrnpk.S)
Spliceosome [BR:
xla03041
]
Common components
Common spliceosomal components
hnRNP proteins
380255 (hnrnpk.S)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
ROKNT
KH_2
KH_KhpA-B
KH-I_KHDC4-BBP
KH_5
KH_Vigilin
DJ-1_PfpI
Motif
Other DBs
NCBI-GeneID:
380255
NCBI-ProteinID:
NP_001080563
Xenbase:
XB-GENE-6253918
UniProt:
Q7ZXK8
A0A974I191
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All DBs
Position
1S:complement(124082986..124094218)
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AA seq
399 aa
AA seq
DB search
METEQEEVEFTNTEANGKRPAEDMEEEQAFKRSRNTDLMVELRILLQSKNAGAVIGKGGK
NIKALRTDYNASVSVPDSSGPERILSMSADIETIGEILKKIIPTLEEYQHFKGNDFDCEL
RLLIHQSLAGGIIGVKGAKIKELREKTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIK
VILDLISESPVKGRTQPYDPNFYDETYDYGGFTMMFDDRRGRPMGFPMHARGGFDRMPPG
PGGRPLPQSRRDYDDMSPRRGPLPPPPGRGGRGGSRARNLPLPPPPPPRGGDRRGRPDHY
DGMGGAGYGRGSFGDIGGPVVTTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPL
EGSDDRIITITGTQDQIQNAQFLLQNSVKQFSEDYSYGF
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggagacagagcaggaagaggttgaattcacaaacacagaagcgaacggtaaacgtcca
gcagaagacatggaggaggaacaggcattcaagagatctagaaacacagatctgatggtt
gagctgcgtattctgcttcagagcaaaaatgctggggcagtaatcggcaaaggaggaaaa
aatattaaggcacttaggacagactacaatgccagtgtttcagtcccagacagcagtggc
cccgagcgtatattaagcatgagcgcagatattgaaacaattggagaaatcctaaagaag
ataattcccacactggaagagtaccaacacttcaaaggaaatgattttgattgtgagttg
aggttattgattcatcaaagtttggctggtggaattattggtgtcaaaggagcaaagatt
aaagaacttagagagaaaacgcagactacaataaagctattccaggagtgctgccctcat
tcgactgatcgtgttgttctgattggaggcaaaccggatagggtggttgaatgcattaaa
gttatacttgatctcatctctgagtcccctgtcaagggcaggactcagccctatgatcct
aacttctatgatgaaacttatgattatggaggatttacaatgatgtttgatgaccgaaga
gggcgccccatgggtttccctatgcatgccaggggtggatttgatcgaatgcctccaggt
cccggaggtcgtcccctgccacagtcgagaagagattatgatgacatgagcccaaggcgg
gggccccttcctccaccccctggtcgtgggggtagaggtggaagtagagctcgtaatctt
cctctcccaccacctccaccacctagaggaggggaccgaagaggaagaccagaccattat
gatggaatgggcggagctggatatggcagaggttctttcggtgatattggtgggccagtt
gtaacaacacaagtaaccattccaaaagatttagctggatcaataattgggaaaggaggt
cagagaattaaacaaatccgccatgaatctggtgcatccatcaaaattgatgagccttta
gaaggatccgatgacagaataattaccattactggcactcaagatcagatacaaaatgca
caatttttgcttcagaacagtgtgaagcagttttctgaagattattcttatgggttttga
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