Xenopus laevis (African clawed frog): 380256
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Entry
380256 CDS
T01010
Symbol
srp54.S, srp54
Name
(RefSeq) signal recognition particle 54kDa S homeolog
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03060
Protein export
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
380256 (srp54.S)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
xla02044
]
380256 (srp54.S)
Enzymes [BR:
xla01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
380256 (srp54.S)
Secretion system [BR:
xla02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
380256 (srp54.S)
Eukaryotic Sec-SRP protein
380256 (srp54.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
cobW
nSTAND3
AAA_33
DUF2209
ResIII
SRPRB
nSTAND_NTPase5
Zeta_toxin
AAA_17
NPHP3_N
APS_kinase
AAA_22
MobB
AAA_19
MeaB
AAA_30
6PF2K
AAA_16
ATP_bind_1
Thymidylate_kin
DpnI_C
AAA_31
AAA_18
ArsA_ATPase
AAA
Motif
Other DBs
NCBI-GeneID:
380256
NCBI-ProteinID:
NP_001080564
Xenbase:
XB-GENE-960998
UniProt:
Q7ZXH4
A0A974H556
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Position
8S:complement(2960330..2976689)
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AA seq
504 aa
AA seq
DB search
MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAI
DLEEMASGLNKRKMIQTAVFKELVKLVDPGVKAWTPTKGKPNVIMFVGLQGSGKTTTCTK
LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVNIAYEGVEKFK
NENFEIVIVDTSGRHKQEDSLFEEMLQVSNAVQPDNIVYVMDASIGQACEAQAKAFKDKV
DVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDI
EGLIDKVNELNLDDNEAMIDKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGFGQDFM
SKGNEQESMARLKKLMTIMDSMNDLELDNTDGAKVFTKQPGRVQRVARGSGASARDVQEL
LAQYTKFAQMVKKMGGIKGLFKGGDMSKNVNPSQMAKLNQQMAKMMDPRVLQHMGGMAGL
QSMMKQFQQGAAGSTKGMMGFNNM
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggtattggcagaccttggacgaaagatcacctcagccttgcgctcactgagcaatgca
accatcatcaatgaagaggtgctcaatgctatgctcaaggaagtatgtacggctttactg
gaagctgatgtaaacataaagcttgtaaaacagctaagggaaaatgttaagtctgctatc
gatctggaggaaatggcatctggcttgaataagcgtaaaatgatccagactgctgtcttc
aaagagcttgtcaagctggtggatccaggggttaaagcatggacacccactaaaggaaaa
ccaaatgtgataatgtttgtgggtttgcaaggaagtggaaaaaccactacgtgtacaaag
ttggcatattattatcaaaggaaaggctggaaaacctgtttgatatgcgctgacactttc
agagctggcgcgtttgatcaattaaaacagaatgccacaaaagccagaatacccttctat
ggcagttacacagaaatggatccagtgaacattgcatatgaaggggtggagaaatttaaa
aatgaaaactttgagatcgtcattgtggacacaagtgggcgccacaaacaggaagattcc
ctgtttgaagaaatgttgcaagtttctaatgcagtacaaccagataatatagtctatgta
atggatgcttctattggacaagcttgtgaagcacaggccaaagccttcaaagataaggtg
gatgtagcatcggtcattgtaaccaagcttgatgggcatgcaaagggtggaggagcactt
agtgcggttgctgctacaaagagtcctatcattttcattggtactggggagcatattgat
gactttgaaccattcaaaacacaacctttcatcagcaagcttcttggtatgggtgacatt
gaaggattgatagataaagtgaatgaattaaatctggatgacaatgaggccatgatcgac
aaattaaagcatggccagttcactttgagagacatgtatgagcaatttcaaaatatcatg
aaaatgggtccattcagccagatcttgggaatgatccccggctttggacaagattttatg
agcaaaggcaacgagcaggaatcaatggctcgactgaagaagctaatgaccatcatggac
agcatgaacgacctggaactggataacaccgatggtgccaaagtttttaccaagcagcct
ggccgtgttcagagagtggcaagaggatccggggcctctgctagagatgtacaagaactg
ctggcacaatatacaaaatttgctcaaatggttaaaaagatgggtggaatcaaaggcctc
ttcaaaggtggtgatatgtcgaaaaatgtaaacccatcacagatggccaaactgaaccag
caaatggccaaaatgatggaccccagagttttgcagcacatgggtggcatggcaggactt
caatcaatgatgaaacagttccaacaaggagcagctggcagcacaaaggggatgatggga
ttcaacaatatgtaa
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