Xenopus laevis (African clawed frog): 380283
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Entry
380283 CDS
T01010
Symbol
nup93.L, An4, An4b, dye, nup93, nup93.S, xnup93
Name
(RefSeq) nuclear pore complex protein Nup93
KO
K14309
nuclear pore complex protein Nup93
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
380283 (nup93.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xla03019
]
380283 (nup93.L)
Messenger RNA biogenesis [BR:
xla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
380283 (nup93.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
Motif
Other DBs
NCBI-GeneID:
380283
NCBI-ProteinID:
NP_001080591
Xenbase:
XB-GENE-5823157
UniProt:
Q7ZX96
Structure
PDB
PDBj
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All DBs
Position
4L:complement(39557811..39597058)
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AA seq
820 aa
AA seq
DB search
MDGEGFGELLQQAEQLAAETEGVTELPHVERNLQEIQQAGCRLRSKTMTRTSQESANVKA
SCTAGSRGLDISHISQRLESLSAATTFEPLEPVKDTDIQGFHKNEKDNALLSAIEESRKR
TFVMAEEYHRESMLVEWEQVKQRVLHTLLASGEDALDFTQESETSYISESGAPGRSSLDN
VEMAYARQMYMYNEKVVSGHLQPSLVDLCTEAAERLDDKNVSDLWVMVKQMTDVPLIPAS
DTLKSRCSGQMQMAFVRQALNYLEQSYKNYTLISVFANLQQAQLGGVPGTYNLVRSFLNI
RLPTTVPGLQDGEIEGYPVWALIYYCMRCGDLMAAQQVVNRAQHQLGDFKNCFQEYIHNK
DRRLSPTTENKLRLHYRRAVRASTDPYKRAVYCIIGRCDVSDNNSEVADKTEDYLWLKLS
QVCFEDEANSSPEDRLTLPQFQKQLFEDYGESHFAVNQQPYLYFQVLFLTAQFEAAIAFL
FRLERTRCHAVHVALALFELKLLLKSTGQSAQLLSQEPGEPQGVRRLNFIRLLMLYTRKF
EPTDPREALQYFYFLRNEKDNQGESMFLRCVSELVIESREFDMLLGKLEKDGSRKPGAID
KFTRDTKTIINKVASVAENKGLFEEAAKLYDLAKNPDKVLELTNKLLSPVVSQISAPQSN
RERLKNMALAIAERYKSQGVSAEKSINSTFYLLLDLITFFDEYHAGHIDLSFDVIERLKL
VPLSQDSVEERVAAFRNFSDEIRHNLSEILLATMNILFTQYKRLKGSGPTTLGRPQRVQE
DKDSVLRSQARALITFAGMIPYRMSGDTNARLVQMEVLMN
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggatggggaagggtttggagagctcctgcagcaggctgaacagcttgctgcagaaaca
gaaggagttactgaactaccccatgtagagaggaacctacaggagatccagcaggctgga
tgtagattgcgctctaaaaccatgactcgcacttctcaggagtcagccaatgtgaaagcg
tcttgtactgctggatcaagaggtcttgacatctctcatatttcccagaggcttgagagt
cttagtgcagccaccacattcgagcctttggaacctgttaaagacacagatattcagggt
tttcataagaatgagaaggacaatgctcttctgtctgccattgaagaatccagaaagaga
acatttgtgatggctgaagaataccaccgggagtccatgcttgtagagtgggaacaagtg
aaacagagagtcttacacacccttcttgcttcaggggaagatgcactagacttcacacag
gaaagtgagacaagttatattagcgagtctggagcaccaggtcgcagttcactagataat
gtggaaatggcatatgcacgacagatgtatatgtacaatgagaaggttgtgagtggacat
ctgcagccaagtctggttgatctgtgcacggaggctgctgaaagactagatgacaagaat
gtgtctgatttatgggttatggtgaagcagatgacagatgttccgttgattccagcttct
gacactctgaaaagccgttgtagtggtcagatgcagatggcttttgtacgtcaggcatta
aattatctagagcaaagctataaaaattacactttgataagtgtatttgccaacctgcag
caggctcagcttggaggtgttcctggaacctacaatcttgtgagaagtttcctgaatatc
cgattgccaaccaccgtaccaggtcttcaggatggagaaattgaaggctacccagtgtgg
gcactgatttactactgtatgcgctgtggggatcttatggcagctcaacaagtggtgaac
agggcccagcatcagctaggagatttcaagaactgttttcaagaatatatacacaataaa
gacagaagattatctccaacaacagaaaacaagcttcgcttgcattacagaagagctgta
agggcaagcaccgacccttacaaaagagctgtatactgcataattgggagatgtgatgta
agtgataacaacagtgaagtggctgataagactgaggattacctgtggctaaagttgagt
caggtttgttttgaagatgaagccaacagttcccctgaagacagactcacattgccacaa
tttcaaaagcaactatttgaggactatggtgaatcccactttgcagttaatcagcagcca
tacctgtactttcaagtcctcttcctgacagcgcagtttgaggcagccattgcttttttg
tttcggttggaacgcacacgttgccatgctgtacatgtggcacttgctctctttgagctg
aaattgcttctgaaatcaacagggcaaagtgcacagctattgagccaggaaccaggcgaa
cctcaaggtgtcaggcgcctaaatttcatccgtctcttgatgctttacactaggaagttt
gagcccactgacccaagggaagcattgcaatacttttattttctcagaaatgagaaggac
aatcaaggagaaagcatgttcctgcgatgtgtcagtgagctggtaattgaaagtcgagag
tttgacatgttactggggaaactggaaaaagacggaagccgaaagccaggggcaattgat
aaattcacaagagatacaaagacaatcattaataaggtggcatctgtggcagaaaacaag
ggacttttcgaggaagctgcaaagttgtatgaccttgcaaagaaccccgacaaggttttg
gagctgaccaacaaattattaagtcctgtggtatcccagattagtgccccgcagtctaac
cgagagcggctcaagaacatggctctagctattgctgagagatacaaaagtcaaggagta
agtgcagagaaatccattaactctacattttaccttctgctggatttaataacctttttt
gatgagtatcatgcaggtcacattgatctttcttttgatgttattgaaagactgaagttg
gtgcctttgagtcaggatagtgtagaagagagagtggcagccttccggaacttcagtgat
gagattagacataacctgtctgaaattcttcttgcaaccatgaatatcttattcactcaa
tacaagaggctgaagggtagtgggccaactactctagggcgtccacagagagtgcaggaa
gataaggattcggttctacgcagtcaagctcgtgctcttatcacctttgcagggatgatt
ccatacaggatgtctggagacacaaatgcccgacttgtacagatggaagttctcatgaac
tga
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