Xenopus laevis (African clawed frog): 380303
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Entry
380303 CDS
T01010
Symbol
chmp5.S, cgi-34, chmp5, chmp5-a, chmp5-b, hspc177, pnas-2, SNF7DC2, vps60
Name
(RefSeq) charged multivesicular body protein 5 S homeolog
KO
K12198
charged multivesicular body protein 5
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04144
Endocytosis
xla04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
380303 (chmp5.S)
09143 Cell growth and death
04217 Necroptosis
380303 (chmp5.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
380303 (chmp5.S)
Membrane trafficking [BR:
xla04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
380303 (chmp5.S)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Snf7
Hydantoinase_B
NPV_P10
DUF948
Alpha-E
RUBC_PIKBD
DUF848
Pox_P4A
PIBF1
Motif
Other DBs
NCBI-GeneID:
380303
NCBI-ProteinID:
NP_001080611
Xenbase:
XB-GENE-6253789
UniProt:
A0A8J0PRA0
Q8AVR6
LinkDB
All DBs
Position
6S:complement(60034312..>60055311)
Genome browser
AA seq
177 aa
AA seq
DB search
MKYKDQMKKMRDGPSKNMVKQKALRVLKQKRMYEQQRDNLNQQSFNMEQANYTIQTLKDT
KTTVDAMKVGAKEMKKAYKQVKIDQIEDLQDQLEDMMENANEIQESLSRSYGTPEIDEDD
LEAELDALGDELLLDDDTSYLDDAVSAPTIPEGVPSDSKNKDGVLVDEFGLPQIPAT
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacaaggatcaaatgaaaaaaatgagagatgggccatccaagaacatggtaaaa
cagaaagccctgcgagttctcaagcagaaaagaatgtatgaacagcagagagataatcta
aaccagcaatcttttaatatggaacaagccaattatactattcagacactaaaggacaca
aaaacaacggtggatgcaatgaaagtaggagctaaggaaatgaaaaaggcttacaagcaa
gtcaaaattgatcagattgaggacttgcaagatcagttggaggatatgatggagaatgcc
aatgaaatccaggaatcacttagtcgaagctatggaacacctgaaattgatgaagatgat
cttgaggctgagctggatgctctaggagatgaacttttgttagatgacgacacctcatat
ttggatgacgctgtctctgccccaactatcccagaaggggttcccagtgactccaaaaat
aaggatggagtactggttgatgaatttggattgccacaaatccctgctacctaa
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